CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH52624
KRH61964

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G50130.1	KRH52624	AT5G39730.1	21798944
AT5G50130.1	KRH61964	AT5G39730.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57109	Soybean	mitochondrion	94.96	94.96
KRH54355	Soybean	cytosol	81.9	83.64
VIT_17s0000g08920.t01	Wine grape	cytosol	75.67	77.27
KRH63592	Soybean	plastid	81.6	77.25
PGSC0003DMT400046811	Potato	plastid	71.22	72.51
AT5G50130.1	Thale cress	mitochondrion	71.51	71.09
PGSC0003DMT400069439	Potato	plastid	49.55	68.44
Solyc03g112540.2.1	Tomato	endoplasmic reticulum	70.92	66.39
GSMUA_Achr1P25440_001	Banana	cytosol	60.53	66.23
Solyc06g071610.1.1	Tomato	plastid	67.66	62.3
CDX71585	Canola	mitochondrion	57.57	57.23
KRH41377	Soybean	cytosol	49.85	49.85
KRH08898	Soybean	cytosol	45.1	48.1
KRH19708	Soybean	nucleus	45.7	47.68
KRH32305	Soybean	plastid	45.7	47.68
KRG95813	Soybean	nucleus	45.7	47.68
KRH67540	Soybean	nucleus	45.1	47.06
KRH38426	Soybean	cytosol	45.1	46.63
KRH08894	Soybean	plastid	29.97	46.54
KRH38433	Soybean	cytosol	43.92	46.4
KRH59919	Soybean	cytosol, plastid	43.32	46.35
Bra037939.1-P	Field mustard	cytosol	68.25	46.28
KRH08897	Soybean	cytosol, mitochondrion	42.73	45.86
KRH38431	Soybean	plastid	43.92	45.82
KRH38419	Soybean	plastid	43.32	45.77
KRG91556	Soybean	cytosol	42.14	45.37
KRH38432	Soybean	cytosol	42.73	45.14
KRH41194	Soybean	cytosol, plastid	42.14	45.08
KRG91557	Soybean	cytosol	25.52	41.35
KRH35271	Soybean	plastid	41.84	40.4
KRH35274	Soybean	cytosol, mitochondrion, plastid	42.14	39.55
KRH08895	Soybean	cytosol	42.14	37.17
CDY37755	Canola	mitochondrion, plastid	68.25	36.92
KRH09442	Soybean	cytosol	27.6	24.67
KRH38907	Soybean	endoplasmic reticulum	27.3	24.34
KRH27209	Soybean	nucleus, plastid	25.52	21.55
KRH55334	Soybean	plastid	25.22	21.3
KRH26074	Soybean	plastid	20.47	20.18

Protein Annotations

EntrezGene:100819058	Gene3D:3.40.50.720	MapMan:35.1	EMBL:ACUP02010340	EnsemblPlantsGene:GLYMA_17G086800	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	UniProt:I1MTE5
EnsemblPlants:KRH03249	ProteinID:KRH03249	ProteinID:KRH03249.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00080
PRINTS:PR00081	PANTHER:PTHR24320	PANTHER:PTHR24320:SF120	InterPro:SDR_fam	SUPFAM:SSF51735	UniParc:UPI000233E69D

Description

hypothetical protein

Coordinates

chr17:+:6703100..6706716

Molecular Weight (calculated)

36976.6 Da

IEP (calculated)

9.663

GRAVY (calculated)

-0.111

Length

337 amino acids

Sequence
(BLAST)

001: MKATLRYLAG LAGPSGFGSN STAEQVTQDC SSLLPSNLTA LITGGTSGIG AETARVLAKR GVRIVIGARD LRKAKEVREK IQKESPHAEV ILLEIDLSSF
101: ASVQRFCSEF LALDLPLNIL INNAGMYSQN LEFSEEKIEM TFATNYLGHF LVTKMLLEKM IDTAKKTGIQ GRIINVSSVI HSWVKRSCFS FNDMLCGKNY
201: NGTRAYAKSK LATILHVKEV ARQLKERNAN VTINAVHPGI VKTGIIRAHK GLITDSLFFI ASKLLKSISQ GASTTCYVAL SEQTDGVSGK YFTDCNESNC
301: SSLANDESEA RKLWNDTHAL LHKRLRQATN SKCFFPT

Best Arabidopsis Sequence Match ( AT5G50130.1 )
(BLAST)

001: MKGTLRYLAG IAGPNGFGSR STAEQVTQHS FFPCSHLTAI ITGGTSGIGA ETARVLAKRG VRVVMAVRDM KKAEMVKERI IRENPEADII LFEIDLSSLS
101: SVARFCSQFL SQDLPLNILI NNAGVFSPNL EFSEEKIELT FATNFLGHYL LTEMLIEKMI DTAEKSGIEG RIINLSSVIH NWVKPDCFSF PKLLHPISRY
201: NGTRAYAQSK LATILHAKAL SKQLKDRNAN VTINAVHPGI VKTGIIRAHK GLFTDSLFLI ASKLLKSISQ GAATTCYVAL SNETKGLSGK YFADCNETNC
301: SDLANDEYVA LKLCTQSRAL IHDHLHEFQI HALPNLCFL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RWK2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.