CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plastid 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19708	Soybean	nucleus	91.95	91.95
KRH67540	Soybean	nucleus	80.81	80.81
KRG95813	Soybean	nucleus	80.5	80.5
VIT_08s0040g03400.t01	Wine grape	plastid	73.99	73.77
GSMUA_Achr8P20890_001	Banana	cytosol, mitochondrion, plastid	72.14	72.81
GSMUA_Achr11P...	Banana	cytosol	72.45	72.22
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	71.52	71.96
PGSC0003DMT400022813	Potato	mitochondrion	71.21	71.88
Solyc10g086390.1.1	Tomato	mitochondrion	71.83	71.83
PGSC0003DMT400049292	Potato	mitochondrion	71.21	71.21
GSMUA_Achr7P15240_001	Banana	plastid	70.9	70.68
Solyc09g010510.2.1	Tomato	cytosol, mitochondrion, plastid	69.66	70.31
CDY68648	Canola	cytosol	44.89	69.38
CDY18436	Canola	cytosol	68.11	68.54
Bra017180.1-P	Field mustard	cytosol	68.11	68.54
CDX81232	Canola	cytosol	67.49	67.91
Bra005188.1-P	Field mustard	cytosol	66.56	67.82
CDY52816	Canola	cytosol	67.18	67.81
CDY40365	Canola	mitochondrion	69.35	67.67
CDX74954	Canola	cytosol	66.87	67.5
CDY10440	Canola	plastid	67.8	67.38
AT5G02540.1	Thale cress	mitochondrion	69.04	67.37
Bra009580.1-P	Field mustard	mitochondrion	69.04	67.37
CDY52817	Canola	cytosol	66.56	67.19
EES02479	Sorghum	cytosol, plastid	66.25	66.88
TraesCS3B01G091800.3	Wheat	cytosol	66.25	66.88
TraesCS5D01G287000.1	Wheat	plastid	66.56	66.77
CDY11217	Canola	mitochondrion	68.42	66.77
Bra005729.1-P	Field mustard	mitochondrion	68.42	66.77
Zm00001d039848_P002	Maize	cytosol, mitochondrion, plastid	65.94	66.56
AT2G37540.1	Thale cress	cytosol	65.94	66.36
Os01t0151700-01	Rice	cytosol	65.94	66.36
TraesCS5B01G279400.1	Wheat	plastid	65.94	66.15
TraesCS5A01G280400.1	Wheat	plastid	65.63	65.84
CDX88292	Canola	cytosol	30.65	63.06
CDY55418	Canola	cytosol	58.2	62.88
TraesCS3A01G077400.2	Wheat	cytosol, plastid	65.02	60.0
HORVU3Hr1G013970.6	Barley	plastid	65.02	59.15
KRG91556	Soybean	cytosol	57.28	59.11
KRH08894	Soybean	plastid	39.32	58.53
KRH08897	Soybean	cytosol, mitochondrion	56.35	57.96
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	24.15	56.93
KRH59919	Soybean	cytosol, plastid	55.11	56.51
KRH41194	Soybean	cytosol, plastid	54.8	56.19
KRH08898	Soybean	cytosol	54.8	56.01
KRH38419	Soybean	plastid	54.8	55.49
KRH38432	Soybean	cytosol	54.49	55.17
KRH38433	Soybean	cytosol	54.18	54.86
KRH38431	Soybean	plastid	54.49	54.49
HORVU5Hr1G075530.8	Barley	cytosol, nucleus, plastid	65.33	54.38
TraesCS3D01G077500.2	Wheat	cytosol, plastid	58.82	54.29
KRH35271	Soybean	plastid	57.89	53.58
Zm00001d039397_P001	Maize	cytosol	39.32	52.26
KRH35274	Soybean	cytosol, mitochondrion, plastid	56.97	51.25
KRH38426	Soybean	cytosol	51.39	50.92
KRG91557	Soybean	cytosol	31.58	49.04
KRH54355	Soybean	cytosol	49.23	48.18
KRH41377	Soybean	cytosol	48.61	46.59
KRH08895	Soybean	cytosol	54.49	46.07
KRH57109	Soybean	mitochondrion	47.99	45.99
KRH03249	Soybean	mitochondrion, plastid	47.68	45.7
KRH63592	Soybean	plastid	48.3	43.82
KRH55334	Soybean	plastid	34.67	28.07
KRH26074	Soybean	plastid	28.17	26.61
KRH27209	Soybean	nucleus, plastid	32.51	26.32
KRH38907	Soybean	endoplasmic reticulum	29.41	25.13
KRH09442	Soybean	cytosol	29.1	24.93

Protein Annotations

EntrezGene:100795299	Gene3D:3.40.50.720	MapMan:35.1	EMBL:ACUP02006111	EMBL:BT094422	UniProt:C6TA87
EnsemblPlantsGene:GLYMA_10G043700	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	ProteinID:KRH32303.1	ProteinID:KRH32304.1	EnsemblPlants:KRH32305	ProteinID:KRH32305	ProteinID:KRH32305.1
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	PANTHER:PTHR24320	PANTHER:PTHR24320:SF81
InterPro:SDR_fam	SUPFAM:SSF51735	UniParc:UPI0001B15FF5	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:3930585..3936499

Molecular Weight (calculated)

35319.7 Da

IEP (calculated)

7.002

GRAVY (calculated)

-0.011

Length

323 amino acids

Sequence
(BLAST)

001: MAGIFSLVTG RPGLSGFGSS STAEQVTEGI DASNLTAIIT GGASGIGLET ARVLAIRKVH VIIAARNMES AKEAKQLILQ EDESACVDIM KLDLCSLKSV
101: RTFVDNFIAL GLPLNILINN AGVMFCPYQQ TEDGIEMQFA TNYLGHFLLT NLLLDKMKQT AKDTGIEGRI VNLSSIAHLY TYEEGIRFDT INDEDGYHEK
201: KAYGQSKLAN ILHTNELSRR LQAEGVNITA NSVHPGVIMT PLMRHSSLLM NFLKMFSFMI WKNVPQGAAT TCYVALHPSL KGVTGKYLQD CNESPPSAHA
301: SNELLGRKLW DFSNKMINSL SKA

Best Arabidopsis Sequence Match ( AT5G02540.1 )
(BLAST)

001: MGLYSLITGR RGPSGFGSAS TAEEVTQGID ATNLTAIITG GTGGIGMETA RVLSKRGAHV VIGARNMGAA ENAKTEILRQ NANARVTLLQ LDLSSIKSIK
101: AFVREFHALH LPLNLLINNA GVMFCPYQLS EDGIELQFAT NHIGHFLLTN LLLDTMKNTA KTSGVEGRIL NVSSVAHIYT YQEGIQFDSI NDICSYSDKR
201: AYGQSKLANI LHANELSRQL QEEGVNITAN SVHPGLILTN LFQHTALLMR FLKFFSFYLW KNIPQGAATT CYVALHPSVK GVTGKYFADC NEVTPSKLAR
301: DETLAQKLWD FSVKLINSVS KKNYLGFDDT T

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KCF2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.