CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74954	Canola	cytosol	99.69	99.69
Bra005188.1-P	Field mustard	cytosol	98.75	99.68
CDY52817	Canola	cytosol	98.75	98.75
CDX81232	Canola	cytosol	91.25	90.97
CDY18436	Canola	cytosol	90.62	90.34
CDX88292	Canola	cytosol	42.81	87.26
AT2G37540.1	Thale cress	cytosol	81.88	81.62
CDY68648	Canola	cytosol	46.56	71.29
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	69.69	69.47
GSMUA_Achr8P20890_001	Banana	cytosol, mitochondrion, plastid	69.06	69.06
CDY10440	Canola	plastid	69.38	68.31
CDY40365	Canola	mitochondrion	70.62	68.28
VIT_08s0040g03400.t01	Wine grape	plastid	68.44	67.59
GSMUA_Achr7P15240_001	Banana	plastid	68.12	67.28
KRH19708	Soybean	nucleus	67.81	67.18
KRH32305	Soybean	plastid	67.81	67.18
CDY11217	Canola	mitochondrion	69.38	67.07
GSMUA_Achr11P...	Banana	cytosol	67.5	66.67
Solyc10g086390.1.1	Tomato	mitochondrion	66.56	65.94
Zm00001d039848_P002	Maize	cytosol, mitochondrion, plastid	65.62	65.62
PGSC0003DMT400022813	Potato	mitochondrion	65.62	65.62
PGSC0003DMT400049292	Potato	mitochondrion	65.94	65.33
EES02479	Sorghum	cytosol, plastid	65.31	65.31
Os01t0151700-01	Rice	cytosol	65.31	65.11
KRH67540	Soybean	nucleus	65.62	65.02
Solyc09g010510.2.1	Tomato	cytosol, mitochondrion, plastid	65.0	65.0
CDY55418	Canola	cytosol	60.62	64.88
KRG95813	Soybean	nucleus	65.31	64.71
TraesCS3B01G091800.3	Wheat	cytosol	63.75	63.75
TraesCS5B01G279400.1	Wheat	plastid	63.12	62.73
TraesCS5D01G287000.1	Wheat	plastid	63.12	62.73
TraesCS5A01G280400.1	Wheat	plastid	62.5	62.11
CDX76338	Canola	cytosol, plastid	57.5	57.14
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	24.38	56.93
TraesCS3A01G077400.2	Wheat	cytosol, plastid	62.19	56.86
HORVU3Hr1G013970.6	Barley	plastid	62.5	56.34
CDX86777	Canola	cytosol	55.0	55.52
CDY13264	Canola	cytosol	55.0	55.52
CDY10884	Canola	plastid	55.62	55.28
CDY69917	Canola	endoplasmic reticulum	52.19	54.75
Zm00001d039397_P001	Maize	cytosol	39.69	52.26
HORVU5Hr1G075530.8	Barley	cytosol, nucleus, plastid	62.81	51.8
TraesCS3D01G077500.2	Wheat	cytosol, plastid	55.62	50.86
CDY72089	Canola	cytosol	31.88	50.75
CDY72311	Canola	cytosol	31.88	50.49
CDY44096	Canola	mitochondrion, plastid	55.94	49.58
CDY10985	Canola	cytosol	50.62	48.8
CDX76323	Canola	cytosol	50.31	48.49
CDY53896	Canola	plastid	29.69	47.5
CDY50440	Canola	mitochondrion	50.31	47.49
CDY53433	Canola	plastid	47.5	43.68
CDX71585	Canola	mitochondrion	39.06	36.87
CDY70072	Canola	cytosol	15.31	29.34
CDX92838	Canola	cytosol	28.12	28.12
CDX89228	Canola	cytosol, nucleus, peroxisome	30.94	26.54
CDY19025	Canola	cytosol	30.94	26.54
CDX89249	Canola	plastid	32.5	26.2
CDY29311	Canola	plastid	32.5	26.2
CDX89877	Canola	plastid	31.88	25.5
CDY18175	Canola	plastid	31.88	25.5
CDY51384	Canola	plastid	31.25	25.13
CDY15470	Canola	plastid	31.25	25.13
CDY14325	Canola	plastid	31.25	24.75
CDY18309	Canola	plastid	26.88	24.64
CDY37755	Canola	mitochondrion, plastid	47.5	24.4
CDX98171	Canola	plastid	26.56	24.36
CDY29859	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	27.81	24.32
CDX96191	Canola	mitochondrion	30.0	21.82
CDY64354	Canola	cytosol	15.31	21.59
CDY27027	Canola	golgi, mitochondrion, nucleus	29.69	21.21
CDY08387	Canola	cytosol, nucleus, plastid	48.12	17.28
CDY47833	Canola	cytosol, nucleus, plastid	47.5	17.06
CDY29840	Canola	plastid	32.19	16.27
CDX92832	Canola	plastid	31.88	16.01
CDY38726	Canola	cytosol, golgi, plastid	29.69	11.42

Protein Annotations

EnsemblPlants:CDY52816	EnsemblPlantsGene:GSBRNA2T00007890001	Gene3D:3.40.50.720	GO:A0A078ISJ6	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF81	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ProteinID:CDY52816
ProteinID:CDY52816.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004EE5935	UniProt:A0A078ISJ6	MapMan:35.1

Description

BnaC04g53630DBnaC04g53630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ISJ6]

Coordinates

chrLK033133:-:42178..45132

Molecular Weight (calculated)

34867.0 Da

IEP (calculated)

7.681

GRAVY (calculated)

0.016

Length

320 amino acids

Sequence
(BLAST)

001: MEIYGMVTGK AGKSGYGSAS TAEDVTHSID AKHLTAIITG GTSGIGLEAA RVLGMRGAHV IIAARNTKAA NDSKEMILQM YPNARIDCLQ LDLSSIKSVR
101: SFIHQFLALN VPLNILINNA GVMFCPFQLS EDGIESQFAT NHIGHFLLTN LLLDKMKSSA RESGIEGRIV NLSSIAHTYT YTEGIMFDYI NDPDRYSEKK
201: AYGQSKLANL LHSNALSRKL QEEGVNITIN SVHPGLITTN LFRHSGLGMA VLKAMSFFLW KNIPQGAATT CYVALHPDLK GVTGKYFTDC NVTTPSNFAI
301: DTTLADKLWD FSIKLVDSLP

Best Arabidopsis Sequence Match ( AT2G37540.1 )
(BLAST)

001: MGIYGVMTGK KGKSGFGSAS TAEDVTQAID ASHLTAIITG GTSGIGLEAA RVLAMRGAHV IIAARNPKAA NESKEMILQM NPNARVDYLQ IDVSSIKSVR
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:O80924]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.