CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40365	Canola	mitochondrion	96.92	95.17
Bra009580.1-P	Field mustard	mitochondrion	96.62	94.86
AT5G02540.1	Thale cress	mitochondrion	92.92	91.24
CDY68648	Canola	cytosol	57.85	89.95
CDY11217	Canola	mitochondrion	90.77	89.12
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	36.62	86.86
CDY55418	Canola	cytosol	79.69	86.62
GSMUA_Achr8P20890_001	Banana	cytosol, mitochondrion, plastid	69.54	70.62
CDY18436	Canola	cytosol	69.54	70.41
VIT_08s0040g03400.t01	Wine grape	plastid	70.15	70.37
Solyc10g086390.1.1	Tomato	mitochondrion	69.85	70.28
CDX81232	Canola	cytosol	68.92	69.78
PGSC0003DMT400049292	Potato	mitochondrion	69.23	69.66
CDY52817	Canola	cytosol	68.31	69.38
CDY52816	Canola	cytosol	68.31	69.38
PGSC0003DMT400022813	Potato	mitochondrion	68.0	69.06
CDX74954	Canola	cytosol	68.0	69.06
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	68.0	68.85
GSMUA_Achr11P...	Banana	cytosol	68.62	68.83
KRH19708	Soybean	nucleus	68.31	68.73
GSMUA_Achr7P15240_001	Banana	plastid	68.31	68.52
KRH67540	Soybean	nucleus	67.69	68.11
KRG95813	Soybean	nucleus	67.69	68.11
KRH32305	Soybean	plastid	67.38	67.8
Solyc09g010510.2.1	Tomato	cytosol, mitochondrion, plastid	66.46	67.5
Zm00001d039848_P002	Maize	cytosol, mitochondrion, plastid	65.23	66.25
EES02479	Sorghum	cytosol, plastid	64.92	65.94
CDX88292	Canola	cytosol	31.38	64.97
Os01t0151700-01	Rice	cytosol	63.08	63.86
TraesCS5B01G279400.1	Wheat	plastid	63.08	63.66
TraesCS3B01G091800.3	Wheat	cytosol	62.46	63.44
TraesCS5D01G287000.1	Wheat	plastid	62.77	63.35
TraesCS5A01G280400.1	Wheat	plastid	62.15	62.73
TraesCS3A01G077400.2	Wheat	cytosol, plastid	60.92	56.57
HORVU3Hr1G013970.6	Barley	plastid	61.23	56.06
CDX76338	Canola	cytosol, plastid	54.77	55.28
CDY10884	Canola	plastid	54.15	54.66
CDY13264	Canola	cytosol	52.92	54.26
CDX86777	Canola	cytosol	52.31	53.63
CDY69917	Canola	endoplasmic reticulum	50.15	53.44
Zm00001d039397_P001	Maize	cytosol	39.69	53.09
HORVU5Hr1G075530.8	Barley	cytosol, nucleus, plastid	62.15	52.06
CDY53896	Canola	plastid	31.38	51.0
TraesCS3D01G077500.2	Wheat	cytosol, plastid	54.15	50.29
CDY72089	Canola	cytosol	30.77	49.75
CDY72311	Canola	cytosol	30.77	49.51
CDY44096	Canola	mitochondrion, plastid	54.77	49.31
CDY10985	Canola	cytosol	48.62	47.59
CDX76323	Canola	cytosol	48.0	46.99
CDY50440	Canola	mitochondrion	48.31	46.31
CDY53433	Canola	plastid	48.62	45.4
CDX71585	Canola	mitochondrion	38.77	37.17
CDY70072	Canola	cytosol	13.85	26.95
CDX92838	Canola	cytosol	26.46	26.88
CDY18175	Canola	plastid	31.69	25.75
CDX89877	Canola	plastid	31.69	25.75
CDY29311	Canola	plastid	31.38	25.69
CDX89249	Canola	plastid	31.38	25.69
CDY15470	Canola	plastid	31.08	25.38
CDY51384	Canola	plastid	31.08	25.38
CDY19025	Canola	cytosol	28.62	24.93
CDX89228	Canola	cytosol, nucleus, peroxisome	28.62	24.93
CDY37755	Canola	mitochondrion, plastid	47.08	24.56
CDY14325	Canola	plastid	29.85	24.01
CDY18309	Canola	plastid	24.92	23.21
CDY29859	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	25.85	22.95
CDX98171	Canola	plastid	24.62	22.92
CDY64354	Canola	cytosol	14.77	21.15
CDX96191	Canola	mitochondrion	27.69	20.45
CDY27027	Canola	golgi, mitochondrion, nucleus	27.69	20.09
CDY47833	Canola	cytosol, nucleus, plastid	48.31	17.62
CDY08387	Canola	cytosol, nucleus, plastid	48.31	17.62
CDY29840	Canola	plastid	31.38	16.11
CDX92832	Canola	plastid	31.08	15.86
CDY38726	Canola	cytosol, golgi, plastid	28.0	10.94

Protein Annotations

EnsemblPlants:CDY10440	EnsemblPlantsGene:GSBRNA2T00032363001	Gene3D:3.40.50.720	GO:A0A078F7F7	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF81	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ProteinID:CDY10440
ProteinID:CDY10440.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004EF1261	UniProt:A0A078F7F7	MapMan:35.1

Description

BnaCnng03410DBnaCnng03410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7F7]

Coordinates

chrLK032003:-:510005..513035

Molecular Weight (calculated)

35845.4 Da

IEP (calculated)

9.741

GRAVY (calculated)

-0.027

Length

325 amino acids

Sequence
(BLAST)

001: MGLYSLITGV RGPSGFGSAS TAEEVTRWID ATHLTAIITG GTGGIGMETA RVMAKRGAHV VIGARNMGAA ENAKTEILRQ NANARVTLLH LDLSSFRSIK
101: AFVRDFHALH LPLNILINNA GVMFCPYQLS EDGIELQFAT NHIGHFLLTN LLLDTMKNTA KTSGVEGRIL NLSSIAHIYT YQEGIQFNSI NDICSYSDKK
201: AYGQSKLANI LHANELSRQL QEKGVNITVN SVHPGLILTN LFQHTAVLMR FLKFFSFYLW KNRPQGAATT CYVALHPSLK EVTGKYFADC NEVTPSKLAR
301: DETLAQKLWD FSVKLINSVS KKLKN

Best Arabidopsis Sequence Match ( AT5G02540.1 )
(BLAST)

001: MGLYSLITGR RGPSGFGSAS TAEEVTQGID ATNLTAIITG GTGGIGMETA RVLSKRGAHV VIGARNMGAA ENAKTEILRQ NANARVTLLQ LDLSSIKSIK
101: AFVREFHALH LPLNLLINNA GVMFCPYQLS EDGIELQFAT NHIGHFLLTN LLLDTMKNTA KTSGVEGRIL NVSSVAHIYT YQEGIQFDSI NDICSYSDKR
201: AYGQSKLANI LHANELSRQL QEEGVNITAN SVHPGLILTN LFQHTALLMR FLKFFSFYLW KNIPQGAATT CYVALHPSVK GVTGKYFADC NEVTPSKLAR
301: DETLAQKLWD FSVKLINSVS KKNYLGFDDT T

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KCF2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.