Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89228 | Canola | cytosol, nucleus, peroxisome | 98.39 | 98.39 |
| CDX92838 | Canola | cytosol | 78.28 | 91.25 |
| AT4G27760.1 | Thale cress | cytosol | 90.62 | 89.89 |
| VIT_17s0000g00520.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 75.87 | 76.28 |
| CDY29859 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 74.53 | 75.96 |
| PGSC0003DMT400026316 | Potato | cytosol | 75.34 | 72.99 |
| Solyc03g098460.2.1 | Tomato | cytosol | 75.07 | 72.73 |
| KRH09442 | Soybean | cytosol | 72.12 | 71.35 |
| KRH38907 | Soybean | endoplasmic reticulum | 71.31 | 70.37 |
| CDY70072 | Canola | cytosol | 30.56 | 68.26 |
| CDY64354 | Canola | cytosol | 40.75 | 66.96 |
| CDX96191 | Canola | mitochondrion | 75.07 | 63.64 |
| Os02t0116500-01 | Rice | cytosol | 67.02 | 62.5 |
| CDY27027 | Canola | golgi, mitochondrion, nucleus | 75.07 | 62.5 |
| GSMUA_Achr7P04190_001 | Banana | cytosol | 67.83 | 61.71 |
| TraesCS6A01G045200.1 | Wheat | cytosol | 67.02 | 61.58 |
| TraesCS6D01G051500.1 | Wheat | cytosol | 67.29 | 61.37 |
| TraesCS6B01G060600.1 | Wheat | cytosol | 67.02 | 60.83 |
| Zm00001d054039_P001 | Maize | cytosol | 66.76 | 59.86 |
| EES04360 | Sorghum | cytosol | 66.22 | 58.39 |
| Zm00001d014994_P001 | Maize | cytosol | 64.08 | 50.21 |
| CDX88292 | Canola | cytosol | 15.82 | 37.58 |
| CDY53896 | Canola | plastid | 19.3 | 36.0 |
| CDY72089 | Canola | cytosol | 17.96 | 33.33 |
| CDY10884 | Canola | plastid | 28.69 | 33.23 |
| CDX76338 | Canola | cytosol, plastid | 28.69 | 33.23 |
| CDY72311 | Canola | cytosol | 17.96 | 33.17 |
| CDY69917 | Canola | endoplasmic reticulum | 26.54 | 32.46 |
| CDX81232 | Canola | cytosol | 27.35 | 31.78 |
| CDY18436 | Canola | cytosol | 27.35 | 31.78 |
| CDY10441 | Canola | cytosol, extracellular, mitochondrion, plastid | 11.53 | 31.39 |
| CDY38726 | Canola | cytosol, golgi, plastid | 69.71 | 31.25 |
| CDY52817 | Canola | cytosol | 26.81 | 31.25 |
| CDY13264 | Canola | cytosol | 26.54 | 31.23 |
| CDX74954 | Canola | cytosol | 26.54 | 30.94 |
| CDY52816 | Canola | cytosol | 26.54 | 30.94 |
| CDX86777 | Canola | cytosol | 26.27 | 30.91 |
| CDY53433 | Canola | plastid | 28.42 | 30.46 |
| CDY44096 | Canola | mitochondrion, plastid | 28.95 | 29.92 |
| CDY10985 | Canola | cytosol | 26.54 | 29.82 |
| CDX76323 | Canola | cytosol | 26.27 | 29.52 |
| CDY50440 | Canola | mitochondrion | 26.27 | 28.91 |
| CDY10440 | Canola | plastid | 24.93 | 28.62 |
| CDY40365 | Canola | mitochondrion | 24.93 | 28.1 |
| CDY55418 | Canola | cytosol | 22.25 | 27.76 |
| CDY11217 | Canola | mitochondrion | 24.4 | 27.49 |
| CDY68648 | Canola | cytosol | 13.4 | 23.92 |
| CDY18175 | Canola | plastid | 24.4 | 22.75 |
| CDX89249 | Canola | plastid | 24.13 | 22.67 |
| CDX89877 | Canola | plastid | 24.13 | 22.5 |
| CDY29311 | Canola | plastid | 23.86 | 22.42 |
| CDY51384 | Canola | plastid | 23.86 | 22.36 |
| CDY15470 | Canola | plastid | 23.86 | 22.36 |
| CDY14325 | Canola | plastid | 23.86 | 22.03 |
| CDX98171 | Canola | plastid | 18.77 | 20.06 |
| CDY18309 | Canola | plastid | 18.77 | 20.06 |
| CDX71585 | Canola | mitochondrion | 17.69 | 19.47 |
| CDY37755 | Canola | mitochondrion, plastid | 24.66 | 14.77 |
| CDX92832 | Canola | plastid | 24.66 | 14.44 |
| CDY29840 | Canola | plastid | 24.4 | 14.38 |
| CDY47833 | Canola | cytosol, nucleus, plastid | 28.42 | 11.9 |
| CDY08387 | Canola | cytosol, nucleus, plastid | 28.42 | 11.9 |
Protein Annotations
| EnsemblPlants:CDY19025 | EnsemblPlantsGene:GSBRNA2T00006279001 | Gene3D:3.40.50.720 | GO:A0A078FXC8 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR24320 | PANTHER:PTHR24320:SF73 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ProteinID:CDY19025 |
| ProteinID:CDY19025.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EED130 | UniProt:A0A078FXC8 | MapMan:35.1 |
Description
BnaC01g20430DBnaC01g20430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FXC8]
Coordinates
chrLK032091:-:434770..437739
Molecular Weight (calculated)
41346.5 Da
IEP (calculated)
5.098
GRAVY (calculated)
-0.097
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MSEERASSLS LTKKKSLGWM EWMRGWSSVF GEILFQRITA SHLQNPLPLP PVNDLTCIVT GSTSGIGRET ARQLAEAGAH VVMAVRNTKA AQELIQQWQN
101: EWSGRGLPLN IEAMELDLLS LDSVARFASA WNARLGPLHV LINNAGIFAM GEAQKFSEDG YEQHMQVNHL APSLLSVLLL PSLIRGSPSR IINVNSVMHS
201: VGFVDPDDMN VVSGSRKYSS VVGYSSSKLA QIMFSSVLFK KLPLETGVSV ICLSPGVVLT NVARDLPRFL QFLYALIPYF IFSPQEGCRS TLFSATDPQI
301: PEYWETLKND DWPVCPFISQ DCRPANPSEE SHNTETAQRV WEKTSEMVGL PLDAVEKLIE GENVQCRYGA QEE
101: EWSGRGLPLN IEAMELDLLS LDSVARFASA WNARLGPLHV LINNAGIFAM GEAQKFSEDG YEQHMQVNHL APSLLSVLLL PSLIRGSPSR IINVNSVMHS
201: VGFVDPDDMN VVSGSRKYSS VVGYSSSKLA QIMFSSVLFK KLPLETGVSV ICLSPGVVLT NVARDLPRFL QFLYALIPYF IFSPQEGCRS TLFSATDPQI
301: PEYWETLKND DWPVCPFISQ DCRPANPSEE SHNTETAQRV WEKTSEMVGL PLDAVEKLIE GENVQCRYGA QEE
001: MSDETTSSPS PAPAKKKQNL GWMEWMRGWS SVFGEILFQR ITASHLENPL PLPSVNDLTC VVTGSTSGIG RETARQLAEA GAHVVMAVRN TKAAQELILQ
101: WQNEWSGKGL PLNIEAMEID LLSLDSVARF AEAFNARLGP LHVLINNAGM FAMGEAQKFS EEGYEQHMQV NHLAPALLSV LLLPSLIRGS PSRIINVNSV
201: MHSVGFVDPD DMNVVSGRRK YSSLIGYSSS KLAQIMFSSI LFKKLPLETG VSVVCLSPGV VLTNVARDLS RILQALYAVI PYFIFSPQEG CRSSLFSATD
301: PQIPEYWETL KNDDWPVCPF ISQDCRPANP SEEAHNTETA QRVWKKTLEL VGLPLDAVEK LIEGENIQCR YGAQHE
101: WQNEWSGKGL PLNIEAMEID LLSLDSVARF AEAFNARLGP LHVLINNAGM FAMGEAQKFS EEGYEQHMQV NHLAPALLSV LLLPSLIRGS PSRIINVNSV
201: MHSVGFVDPD DMNVVSGRRK YSSLIGYSSS KLAQIMFSSI LFKKLPLETG VSVVCLSPGV VLTNVARDLS RILQALYAVI PYFIFSPQEG CRSSLFSATD
301: PQIPEYWETL KNDDWPVCPF ISQDCRPANP SEEAHNTETA QRVWKKTLEL VGLPLDAVEK LIEGENIQCR YGAQHE
Arabidopsis Description
FEYDehydrogenase/reductase SDR family member FEY [Source:UniProtKB/Swiss-Prot;Acc:F4JJR8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.