Factsheet for TraesCS6A01G045200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G060600.1	Wheat	cytosol	98.52	97.32
TraesCS6D01G051500.1	Wheat	cytosol	97.78	97.07
Os02t0116500-01	Rice	cytosol	78.33	79.5
Zm00001d054039_P001	Maize	cytosol	80.3	78.37
EES04360	Sorghum	cytosol	81.53	78.25
VIT_17s0000g00520.t01	Wine grape	cytosol, mitochondrion, peroxisome	65.52	71.7
CDX92838	Canola	cytosol	53.94	68.44
KRH09442	Soybean	cytosol	63.05	67.9
CDX89228	Canola	cytosol, nucleus, peroxisome	61.82	67.29
Solyc03g098460.2.1	Tomato	cytosol	63.79	67.27
Bra026308.1-P	Field mustard	cytosol, nucleus, peroxisome	61.58	67.02
CDY19025	Canola	cytosol	61.58	67.02
Zm00001d014994_P001	Maize	cytosol	78.57	67.02
PGSC0003DMT400026316	Potato	cytosol	63.55	67.01
GSMUA_Achr7P04190_001	Banana	cytosol	67.24	66.59
KRH38907	Soybean	endoplasmic reticulum	61.82	66.4
AT4G27760.1	Thale cress	cytosol	60.1	64.89
AT5G53090.1	Thale cress	cytosol	58.37	63.2
AT5G53100.1	Thale cress	cytosol, golgi, mitochondrion, plasma membrane	53.45	59.62
Bra019028.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	59.36	59.36
CDY29859	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	52.22	57.92
Bra029096.1-P	Field mustard	nucleus	52.71	56.61
CDY64354	Canola	cytosol	31.28	55.95
Bra022628.1-P	Field mustard	cytosol, mitochondrion	54.68	55.36
CDX96191	Canola	mitochondrion	57.39	52.95
CDY27027	Canola	golgi, mitochondrion, nucleus	56.4	51.12
TraesCS4A01G492800.1	Wheat	mitochondrion, plastid	10.34	36.52
TraesCS4A01G311400.1	Wheat	mitochondrion, plastid	25.37	32.59
TraesCS4A01G218300.1	Wheat	mitochondrion	23.89	30.03
TraesCS5A01G527400.1	Wheat	mitochondrion	23.65	28.83
TraesCS5A01G527300.1	Wheat	mitochondrion	23.89	28.53
TraesCS1A01G207500.1	Wheat	cytosol	21.92	28.25
TraesCS7A01G061000.1	Wheat	mitochondrion, plastid	24.14	27.61
TraesCS3A01G077400.2	Wheat	cytosol, plastid	23.65	27.43
TraesCS5A01G280400.1	Wheat	plastid	21.67	27.33
TraesCS4A01G428800.1	Wheat	mitochondrion, plastid	23.89	27.02
CDY38726	Canola	cytosol, golgi, plastid	51.97	25.36
TraesCS2A01G590600.1	Wheat	plastid	22.91	23.97
TraesCS1A01G171000.1	Wheat	golgi, plastid	21.92	21.34

Protein Annotations

EnsemblPlants:TraesCS6A01G045200.1	EnsemblPlantsGene:TraesCS6A01G045200	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR24320
PANTHER:PTHR24320:SF73	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SEG:seg	SUPFAM:SSF51735
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:23411742..23414924

Molecular Weight (calculated)

44419.2 Da

IEP (calculated)

5.304

GRAVY (calculated)

-0.168

Length

406 amino acids

Sequence
(BLAST)

001: MAGDLRRRRP AGAADAGGEE EGDGGAEAAA KAGPPSGGEE AGRGRKEALG WLEWSRGWMG VVGEFFFQRI AASHLANPLE LPPLDGVSII VTGATSGIGL
101: EIARQLAQAG AHLVMAVRRP KVARELIQKW QNEQTEVSMP LNIEVMELDL ISLDSVARFA DTWNARMAPL HVLINNAGIF TIGEPQRFTK DGYEEHMQVN
201: HLAPALLAML LLPSLIRGSP SRIINVNSVM HTIGFVDAED MNLTSGKHKY RSWLGYSNSK LAQVKFSSIF HKRIPAEAGV HIVCASPGIV HTNVARDLPK
301: ILVAGYRLIP YFIFDPQEGS RSTLFAASDP QVPEYCETLK SEDWPVCACI NYDCNPMNAS EEAHDLETSQ LVWEKTLEMI GLPSDALEKL IEGEPVQCRY
401: GQQKAE

Best Arabidopsis Sequence Match ( AT4G27760.1 )
(BLAST)

001: MSDETTSSPS PAPAKKKQNL GWMEWMRGWS SVFGEILFQR ITASHLENPL PLPSVNDLTC VVTGSTSGIG RETARQLAEA GAHVVMAVRN TKAAQELILQ
101: WQNEWSGKGL PLNIEAMEID LLSLDSVARF AEAFNARLGP LHVLINNAGM FAMGEAQKFS EEGYEQHMQV NHLAPALLSV LLLPSLIRGS PSRIINVNSV
201: MHSVGFVDPD DMNVVSGRRK YSSLIGYSSS KLAQIMFSSI LFKKLPLETG VSVVCLSPGV VLTNVARDLS RILQALYAVI PYFIFSPQEG CRSSLFSATD
301: PQIPEYWETL KNDDWPVCPF ISQDCRPANP SEEAHNTETA QRVWKKTLEL VGLPLDAVEK LIEGENIQCR YGAQHE

Arabidopsis Description

FEYDehydrogenase/reductase SDR family member FEY [Source:UniProtKB/Swiss-Prot;Acc:F4JJR8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.