Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G091800.3 | Wheat | cytosol | 85.71 | 93.75 |
| Os01t0151700-01 | Rice | cytosol | 77.71 | 84.74 |
| Zm00001d039848_P002 | Maize | cytosol, mitochondrion, plastid | 77.14 | 84.38 |
| EES02479 | Sorghum | cytosol, plastid | 77.14 | 84.38 |
| HORVU3Hr1G013970.6 | Barley | plastid | 84.29 | 83.1 |
| TraesCS5A01G280400.1 | Wheat | plastid | 74.29 | 80.75 |
| TraesCS3D01G077500.2 | Wheat | cytosol, plastid | 78.86 | 78.86 |
| GSMUA_Achr8P20890_001 | Banana | cytosol, mitochondrion, plastid | 67.43 | 73.75 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 66.57 | 72.59 |
| GSMUA_Achr7P15240_001 | Banana | plastid | 65.14 | 70.37 |
| PGSC0003DMT400049292 | Potato | mitochondrion | 63.71 | 69.04 |
| GSMUA_Achr11P... | Banana | cytosol | 63.71 | 68.83 |
| Solyc10g086390.1.1 | Tomato | mitochondrion | 63.43 | 68.73 |
| VIT_08s0040g03400.t01 | Wine grape | plastid | 63.14 | 68.21 |
| Solyc09g010510.2.1 | Tomato | cytosol, mitochondrion, plastid | 60.86 | 66.56 |
| PGSC0003DMT400022813 | Potato | mitochondrion | 60.86 | 66.56 |
| Zm00001d039397_P001 | Maize | cytosol | 45.43 | 65.43 |
| KRH32305 | Soybean | plastid | 60.0 | 65.02 |
| KRH19708 | Soybean | nucleus | 60.0 | 65.02 |
| KRG95813 | Soybean | nucleus | 59.71 | 64.71 |
| KRH67540 | Soybean | nucleus | 59.43 | 64.4 |
| CDX88292 | Canola | cytosol | 28.86 | 64.33 |
| Bra017180.1-P | Field mustard | cytosol | 58.86 | 64.17 |
| CDX81232 | Canola | cytosol | 58.86 | 64.17 |
| CDY18436 | Canola | cytosol | 58.57 | 63.86 |
| Bra005188.1-P | Field mustard | cytosol | 56.57 | 62.46 |
| CDY68648 | Canola | cytosol | 37.14 | 62.2 |
| CDY52816 | Canola | cytosol | 56.86 | 62.19 |
| CDX74954 | Canola | cytosol | 56.86 | 62.19 |
| CDY52817 | Canola | cytosol | 56.57 | 61.88 |
| AT2G37540.1 | Thale cress | cytosol | 56.29 | 61.37 |
| CDY40365 | Canola | mitochondrion | 57.71 | 61.03 |
| CDY10440 | Canola | plastid | 56.57 | 60.92 |
| Bra009580.1-P | Field mustard | mitochondrion | 57.43 | 60.73 |
| CDY11217 | Canola | mitochondrion | 57.14 | 60.42 |
| Bra005729.1-P | Field mustard | mitochondrion | 57.14 | 60.42 |
| AT5G02540.1 | Thale cress | mitochondrion | 56.86 | 60.12 |
| CDY55418 | Canola | cytosol | 48.86 | 57.19 |
| TraesCS4A01G311400.1 | Wheat | mitochondrion, plastid | 50.29 | 55.7 |
| TraesCS4A01G218300.1 | Wheat | mitochondrion | 50.57 | 54.8 |
| CDY10441 | Canola | cytosol, extracellular, mitochondrion, plastid | 21.43 | 54.74 |
| TraesCS4A01G492800.1 | Wheat | mitochondrion, plastid | 17.71 | 53.91 |
| TraesCS1A01G207500.1 | Wheat | cytosol | 47.71 | 53.02 |
| TraesCS5A01G527400.1 | Wheat | mitochondrion | 46.29 | 48.65 |
| TraesCS5A01G527300.1 | Wheat | mitochondrion | 46.0 | 47.35 |
| TraesCS7A01G061000.1 | Wheat | mitochondrion, plastid | 43.43 | 42.82 |
| TraesCS4A01G428800.1 | Wheat | mitochondrion, plastid | 42.86 | 41.78 |
| TraesCS2A01G590600.1 | Wheat | plastid | 27.43 | 24.74 |
| TraesCS6A01G045200.1 | Wheat | cytosol | 27.43 | 23.65 |
| TraesCS1A01G171000.1 | Wheat | golgi, plastid | 25.71 | 21.58 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G077400.2 | EnsemblPlantsGene:TraesCS3A01G077400 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR24320 |
| PANTHER:PTHR24320:SF81 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | SEG:seg | SUPFAM:SSF51735 |
| TIGR:cd05327 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:49478276..49482110
Molecular Weight (calculated)
38225.5 Da
IEP (calculated)
8.156
GRAVY (calculated)
0.051
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MGILSLITGK PGASGFGSGS TAEQVTEGIS AAGLTVLVTG GSSGIGLETS RVFALRGAHV IIAARNTEAA SEARKRIMEI HPVARVDVLK LDLSSLKSVR
101: AFADQFNSMN LPLNILINNA GVMFCPFQLS EDEVEMQFAT NHLGHFLLTN LLLDNMKTTA KSTGIEGRIV NLSSVAHLHT YPKGILFDQL NDKKIYNDKM
201: AYGQSKLANI LHAKELSRRL KEEGANITVN CVHPGLIMTN LMRHSFALMS DSSCHLLVLE ECTPGSYLFL ALTKFLILTM TQHLPYKELR VFFLQGAATT
301: CYVGLNPQLK GMTGKYFADC NEEKTSAHAK SDALAKQLWE FSEELIRSAK
101: AFADQFNSMN LPLNILINNA GVMFCPFQLS EDEVEMQFAT NHLGHFLLTN LLLDNMKTTA KSTGIEGRIV NLSSVAHLHT YPKGILFDQL NDKKIYNDKM
201: AYGQSKLANI LHAKELSRRL KEEGANITVN CVHPGLIMTN LMRHSFALMS DSSCHLLVLE ECTPGSYLFL ALTKFLILTM TQHLPYKELR VFFLQGAATT
301: CYVGLNPQLK GMTGKYFADC NEEKTSAHAK SDALAKQLWE FSEELIRSAK
001: MGIYGVMTGK KGKSGFGSAS TAEDVTQAID ASHLTAIITG GTSGIGLEAA RVLAMRGAHV IIAARNPKAA NESKEMILQM NPNARVDYLQ IDVSSIKSVR
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:O80924]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.