Factsheet for TraesCS5A01G527300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G290300.1
TraesCS1B01G299500.1
TraesCS1D01G288900.1
TraesCS2A01G364600.1
TraesCS2B01G383200.1
TraesCS2D01G362600.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24050.1	TraesCS1A01G290300.1	AT1G20770.1	21798944
AT4G24050.1	TraesCS1B01G299500.1	AT1G20770.1	21798944
AT4G24050.1	TraesCS1D01G288900.1	AT1G20770.1	21798944
AT4G24050.1	TraesCS2A01G364600.1	AT1G20770.1	21798944
AT4G24050.1	TraesCS2B01G383200.1	AT1G20770.1	21798944
AT4G24050.1	TraesCS2D01G362600.1	AT1G20770.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G527400.1	Wheat	mitochondrion	93.82	95.8
TraesCS4B01G358200.1	Wheat	mitochondrion, plastid	93.82	95.8
TraesCS4D01G351700.1	Wheat	mitochondrion, plastid	94.41	91.19
HORVU4Hr1G086380.1	Barley	mitochondrion, plastid	92.65	91.04
Os03t0115700-01	Rice	mitochondrion	83.82	85.84
OQU93381	Sorghum	mitochondrion	84.71	81.13
Zm00001d027353_P001	Maize	mitochondrion	83.82	78.95
GSMUA_Achr8P11870_001	Banana	cytosol	73.24	73.24
CDY53896	Canola	plastid	41.18	70.0
VIT_02s0025g02190.t01	Wine grape	cytosol	68.82	69.64
KRH41377	Soybean	cytosol	68.53	69.14
Solyc08g082870.2.1	Tomato	cytosol	67.65	68.25
PGSC0003DMT400031933	Potato	cytosol	67.65	68.25
GSMUA_Achr11P...	Banana	cytosol	68.53	67.54
CDY72311	Canola	cytosol	39.41	66.34
AT4G24050.1	Thale cress	cytosol	64.71	66.27
Bra019248.1-P	Field mustard	cytosol	64.41	65.96
CDY72089	Canola	cytosol	38.82	65.67
CDY10985	Canola	cytosol	63.24	64.76
AT1G64590.1	Thale cress	plastid	63.53	64.67
CDX76323	Canola	cytosol	62.94	64.46
Bra013757.1-P	Field mustard	cytosol	62.94	64.46
Bra027706.1-P	Field mustard	plastid	65.0	63.87
CDY50440	Canola	mitochondrion	63.24	63.42
CDY53433	Canola	plastid	64.71	63.22
TraesCS7A01G061000.1	Wheat	mitochondrion, plastid	65.88	63.1
Bra027725.1-P	Field mustard	plastid	64.12	61.58
TraesCS4A01G428800.1	Wheat	mitochondrion, plastid	65.0	61.56
TraesCS4A01G492800.1	Wheat	mitochondrion, plastid	18.53	54.78
TraesCS5A01G280400.1	Wheat	plastid	46.18	48.76
TraesCS4A01G311400.1	Wheat	mitochondrion, plastid	45.0	48.42
TraesCS4A01G218300.1	Wheat	mitochondrion	45.0	47.37
TraesCS3A01G077400.2	Wheat	cytosol, plastid	47.35	46.0
TraesCS1A01G207500.1	Wheat	cytosol	42.06	45.4
CDY47833	Canola	cytosol, nucleus, plastid	63.82	24.35
CDY08387	Canola	cytosol, nucleus, plastid	63.82	24.35
TraesCS6A01G045200.1	Wheat	cytosol	28.53	23.89
TraesCS2A01G590600.1	Wheat	plastid	26.18	22.94
TraesCS1A01G171000.1	Wheat	golgi, plastid	25.59	20.86
Bra027724.1-P	Field mustard	cytosol, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS5A01G527300.1	EnsemblPlantsGene:TraesCS5A01G527300	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR24320
PANTHER:PTHR24320:SF114	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SEG:seg	SUPFAM:SSF51735
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:687873463..687875091

Molecular Weight (calculated)

36240.7 Da

IEP (calculated)

9.413

GRAVY (calculated)

0.049

Length

340 amino acids

Sequence
(BLAST)

001: MPKMLQAARY LLGSPGASGF GSKSTAEEVT AACPDLGSLT AIITGATSGI GAETARVLAK RGARVVIPAR SVKAAEDMRA RILAECPGAD VLVLHLDLSS
101: LASVRDFARR FLSLGLPLHL LINNAGKFSH GQLALSEDGV EMTFATNYLG HFLLTKLLLG RMAETAAETG VQGRIVNVSS SVHGWFSGDW ADYLQLVTRR
201: KIPYDATQAY AVSKLANVLH TKELAARLQE MGADVTVNCV HPGIVRTRLN RDREGLITDL VFVLLSKLLK TTPQAAATTC YAAVHPRLAG VSGRYLADCN
301: EALPSPAAAS RREAARLWQA SEDMISGSSS QQGSTKERNI

Best Arabidopsis Sequence Match ( AT4G24050.1 )
(BLAST)

001: MIETGKYLLG AAGASGFGSK STAEEVTENC DLRSITAVIT GATSGIGAET ARVLAKRGAR LIFPARNVKA AEEAKERIVS EFPETEIVVM KLDLSSIASV
101: RNFVADFESL DLPLNLLINN AGKLAHEHAI SEDGIEMTFA TNYLGHFLLT NLLLNKMIQT AEETGVQGRI VNVTSGIHGW FSGDLIEYLR LISQPKCQFD
201: ATRAYALSKL ANVLHTKELS SRLQKIGANV TVNCVHPGVV RTRLTRDREG LLTDLVFFLA SKLVKTVPQA AATTCYVATN PRLVNVSGKY FTDCNETTPS
301: GLGTNSSEAT KLWAASEILV TQHSKTSFDP CS

Arabidopsis Description

AT4g24050/T19F6_40 [Source:UniProtKB/TrEMBL;Acc:O22985]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.