Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G061000.1 | Wheat | mitochondrion, plastid | 94.15 | 95.21 |
| TraesCS7D01G055800.1 | Wheat | mitochondrion, plastid | 95.54 | 94.75 |
| HORVU7Hr1G011180.12 | Barley | plastid | 91.92 | 91.92 |
| Os06t0129100-01 | Rice | mitochondrion | 73.54 | 74.79 |
| EER87765 | Sorghum | mitochondrion | 74.37 | 74.17 |
| Zm00001d045495_P001 | Maize | mitochondrion | 74.09 | 73.68 |
| GSMUA_Achr8P11870_001 | Banana | cytosol | 64.9 | 68.53 |
| TraesCS5A01G527400.1 | Wheat | mitochondrion | 61.84 | 66.67 |
| TraesCS5A01G527300.1 | Wheat | mitochondrion | 61.56 | 65.0 |
| VIT_02s0025g02190.t01 | Wine grape | cytosol | 59.33 | 63.39 |
| GSMUA_Achr11P... | Banana | cytosol | 60.72 | 63.19 |
| CDY53896 | Canola | plastid | 35.1 | 63.0 |
| KRH41377 | Soybean | cytosol | 58.22 | 62.02 |
| PGSC0003DMT400031933 | Potato | cytosol | 57.94 | 61.72 |
| AT4G24050.1 | Thale cress | cytosol | 56.82 | 61.45 |
| AT1G64590.1 | Thale cress | plastid | 57.1 | 61.38 |
| Bra019248.1-P | Field mustard | cytosol | 56.55 | 61.14 |
| Solyc08g082870.2.1 | Tomato | cytosol | 57.38 | 61.13 |
| Bra013757.1-P | Field mustard | cytosol | 55.71 | 60.24 |
| CDY10985 | Canola | cytosol | 55.71 | 60.24 |
| Bra027706.1-P | Field mustard | plastid | 57.94 | 60.12 |
| CDX76323 | Canola | cytosol | 55.43 | 59.94 |
| CDY72311 | Canola | cytosol | 33.7 | 59.9 |
| CDY53433 | Canola | plastid | 57.66 | 59.48 |
| CDY72089 | Canola | cytosol | 33.15 | 59.2 |
| CDY50440 | Canola | mitochondrion | 55.43 | 58.7 |
| Bra027725.1-P | Field mustard | plastid | 57.38 | 58.19 |
| TraesCS4A01G311400.1 | Wheat | mitochondrion, plastid | 40.67 | 46.2 |
| TraesCS5A01G280400.1 | Wheat | plastid | 40.95 | 45.65 |
| TraesCS4A01G492800.1 | Wheat | mitochondrion, plastid | 14.48 | 45.22 |
| TraesCS4A01G218300.1 | Wheat | mitochondrion | 40.67 | 45.2 |
| TraesCS1A01G207500.1 | Wheat | cytosol | 39.28 | 44.76 |
| TraesCS3A01G077400.2 | Wheat | cytosol, plastid | 41.78 | 42.86 |
| TraesCS6A01G045200.1 | Wheat | cytosol | 27.02 | 23.89 |
| CDY47833 | Canola | cytosol, nucleus, plastid | 57.66 | 23.23 |
| CDY08387 | Canola | cytosol, nucleus, plastid | 57.38 | 23.12 |
| TraesCS2A01G590600.1 | Wheat | plastid | 24.79 | 22.94 |
| TraesCS1A01G171000.1 | Wheat | golgi, plastid | 24.79 | 21.34 |
| Bra027724.1-P | Field mustard | cytosol, plastid | 0.56 | 0.37 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G428800.1 | EnsemblPlantsGene:TraesCS4A01G428800 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR24320 |
| PANTHER:PTHR24320:SF147 | PFAM:PF00106 | PRINTS:PR00081 | SEG:seg | SUPFAM:SSF51735 | TIGR:cd05327 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:699887515..699889113
Molecular Weight (calculated)
37896.5 Da
IEP (calculated)
9.880
GRAVY (calculated)
0.140
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSLRYLAG SAGPSGYGSR TTAEEATLPA GDLGHITAIV TGATSGIGAE TARVLARRGA RLVLPARNLK AAEETRARIL ADLGPGGHRV VVLPLDLSSL
101: GSVRRFVARF VALRLPLNLL INNAGQYAER FAVSEDGVEM TFATNYLGHF LLTELLLPTM ADTARASGVQ GRVVNVSSTV HAWFAADAGD DGPLAYLSRV
201: TRKATPYDPT RAYALSKLAN VLHTTVLAGR LREMGADVTA NCVHPGIVRT RLIRDRAGLV TNTVFFLASK LLKTVPQAAA TTCYAAVHPA VAGVSGRYFA
301: DCNEAAPSRL ACSAGEAARL WSFSEAITAE KVKEESALPV TSFRFQVQSS NADRGMAIA
101: GSVRRFVARF VALRLPLNLL INNAGQYAER FAVSEDGVEM TFATNYLGHF LLTELLLPTM ADTARASGVQ GRVVNVSSTV HAWFAADAGD DGPLAYLSRV
201: TRKATPYDPT RAYALSKLAN VLHTTVLAGR LREMGADVTA NCVHPGIVRT RLIRDRAGLV TNTVFFLASK LLKTVPQAAA TTCYAAVHPA VAGVSGRYFA
301: DCNEAAPSRL ACSAGEAARL WSFSEAITAE KVKEESALPV TSFRFQVQSS NADRGMAIA
001: MKGTLRYLAG IAGPNGFGSR STAEQVTQHS FFPCSHLTAI ITGGTSGIGA ETARVLAKRG VRVVMAVRDM KKAEMVKERI IRENPEADII LFEIDLSSLS
101: SVARFCSQFL SQDLPLNILI NNAGVFSPNL EFSEEKIELT FATNFLGHYL LTEMLIEKMI DTAEKSGIEG RIINLSSVIH NWVKPDCFSF PKLLHPISRY
201: NGTRAYAQSK LATILHAKAL SKQLKDRNAN VTINAVHPGI VKTGIIRAHK GLFTDSLFLI ASKLLKSISQ GAATTCYVAL SNETKGLSGK YFADCNETNC
301: SDLANDEYVA LKLCTQSRAL IHDHLHEFQI HALPNLCFL
101: SVARFCSQFL SQDLPLNILI NNAGVFSPNL EFSEEKIELT FATNFLGHYL LTEMLIEKMI DTAEKSGIEG RIINLSSVIH NWVKPDCFSF PKLLHPISRY
201: NGTRAYAQSK LATILHAKAL SKQLKDRNAN VTINAVHPGI VKTGIIRAHK GLFTDSLFLI ASKLLKSISQ GAATTCYVAL SNETKGLSGK YFADCNETNC
301: SDLANDEYVA LKLCTQSRAL IHDHLHEFQI HALPNLCFL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RWK2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.