Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53896 | Canola | plastid | 54.79 | 91.5 |
| CDY53433 | Canola | plastid | 91.62 | 87.93 |
| Bra027706.1-P | Field mustard | plastid | 90.12 | 86.99 |
| Bra027725.1-P | Field mustard | plastid | 90.42 | 85.31 |
| PGSC0003DMT400031933 | Potato | cytosol | 72.75 | 72.11 |
| Solyc08g082870.2.1 | Tomato | cytosol | 72.75 | 72.11 |
| AT4G24050.1 | Thale cress | cytosol | 70.96 | 71.39 |
| KRH41377 | Soybean | cytosol | 71.86 | 71.22 |
| VIT_02s0025g02190.t01 | Wine grape | cytosol | 70.66 | 70.24 |
| GSMUA_Achr8P11870_001 | Banana | cytosol | 68.86 | 67.65 |
| GSMUA_Achr11P... | Banana | cytosol | 67.07 | 64.93 |
| TraesCS4B01G358400.1 | Wheat | mitochondrion | 64.67 | 64.86 |
| TraesCS5A01G527400.1 | Wheat | mitochondrion | 64.67 | 64.86 |
| Os03t0115700-01 | Rice | mitochondrion | 64.37 | 64.76 |
| TraesCS4D01G351800.1 | Wheat | mitochondrion | 64.67 | 64.67 |
| TraesCS4B01G358200.1 | Wheat | mitochondrion, plastid | 64.37 | 64.56 |
| TraesCS5A01G527300.1 | Wheat | mitochondrion | 64.67 | 63.53 |
| TraesCS4B01G358500.1 | Wheat | mitochondrion | 64.97 | 63.08 |
| HORVU4Hr1G086380.1 | Barley | mitochondrion, plastid | 64.37 | 62.14 |
| TraesCS4D01G351700.1 | Wheat | mitochondrion, plastid | 64.07 | 60.8 |
| Os06t0129100-01 | Rice | mitochondrion | 64.07 | 60.62 |
| OQU93381 | Sorghum | mitochondrion | 63.47 | 59.72 |
| Zm00001d027353_P001 | Maize | mitochondrion | 63.47 | 58.73 |
| TraesCS4B01G358300.1 | Wheat | plastid | 54.79 | 58.65 |
| EER87765 | Sorghum | mitochondrion | 63.17 | 58.61 |
| HORVU7Hr1G011180.12 | Barley | plastid | 62.87 | 58.5 |
| Zm00001d045495_P001 | Maize | mitochondrion | 63.17 | 58.45 |
| TraesCS7A01G061000.1 | Wheat | mitochondrion, plastid | 61.98 | 58.31 |
| TraesCS7D01G055800.1 | Wheat | mitochondrion, plastid | 62.57 | 57.73 |
| TraesCS4A01G428800.1 | Wheat | mitochondrion, plastid | 61.38 | 57.1 |
| AT5G50130.1 | Thale cress | mitochondrion | 50.3 | 49.56 |
| AT2G37540.1 | Thale cress | cytosol | 46.41 | 48.29 |
| AT5G02540.1 | Thale cress | mitochondrion | 46.71 | 47.13 |
| AT4G11410.1 | Thale cress | cytosol, mitochondrion | 42.22 | 44.48 |
| AT4G23430.2 | Thale cress | plastid | 42.81 | 44.41 |
| AT4G23420.3 | Thale cress | plastid | 42.22 | 42.34 |
| CDY08387 | Canola | cytosol, nucleus, plastid | 90.12 | 33.78 |
| CDY47833 | Canola | cytosol, nucleus, plastid | 90.12 | 33.78 |
| AT5G53100.1 | Thale cress | cytosol, golgi, mitochondrion, plasma membrane | 30.24 | 27.75 |
| AT4G27760.1 | Thale cress | cytosol | 30.24 | 26.86 |
| AT5G53090.1 | Thale cress | cytosol | 29.94 | 26.67 |
| AT4G27440.1 | Thale cress | plastid | 28.74 | 23.94 |
| AT1G03630.1 | Thale cress | plastid | 28.74 | 23.94 |
| AT5G54190.1 | Thale cress | plastid | 27.25 | 22.47 |
| Bra027724.1-P | Field mustard | cytosol, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | EntrezGene:842767 | UniProt:A0A178WEV2 | ProteinID:AAF19676.1 | ProteinID:AEE34258.1 |
| ArrayExpress:AT1G64590 | EnsemblPlantsGene:AT1G64590 | RefSeq:AT1G64590 | TAIR:AT1G64590 | RefSeq:AT1G64590-TAIR-G | EnsemblPlants:AT1G64590.1 |
| TAIR:AT1G64590.1 | EMBL:AY048204 | Unigene:At.16563 | EMBL:BT003040 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_176640.1 |
| ProteinID:OAP16321.1 | PFAM:PF00106 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00081 | PANTHER:PTHR24320 |
| PANTHER:PTHR24320:SF114 | UniProt:Q9SGV6 | InterPro:SDR_fam | SUPFAM:SSF51735 | UniParc:UPI000000BEA9 | SEG:seg |
Description
At1g64590/F1N19_15 [Source:UniProtKB/TrEMBL;Acc:Q9SGV6]
Coordinates
chr1:+:23993477..23995509
Molecular Weight (calculated)
36382.7 Da
IEP (calculated)
9.723
GRAVY (calculated)
-0.053
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MIETVKHLIG SGGPSGFGSR STADHVTCNS DLRSLTAIIT GATSGIGAET ARVLAKRGAR LVLPARSVKT AEETKARILS EFPDAEIIVM HLDLSSLTSV
101: RRFVDDFESL NLPLNILINN AGKYAHKHAL SEDGVEMTFA TNYLGHFLLT KLLLKKMIET AAQTGVQGRI VNVTSVVHSW FSGDMLQYLA DISRNNRNYD
201: ATRAYALSKL ANVLHTVELS RLLHKMDANV TANCVHPGIV KTRLTRDREG VVTDLVFFLT SKLLKSVPQA AATTCYVATS PRLRNVCGKY FSDCNEARSS
301: KSGSCNLKAQ RLWTASDLLV SPPNSTTNLS HTSF
101: RRFVDDFESL NLPLNILINN AGKYAHKHAL SEDGVEMTFA TNYLGHFLLT KLLLKKMIET AAQTGVQGRI VNVTSVVHSW FSGDMLQYLA DISRNNRNYD
201: ATRAYALSKL ANVLHTVELS RLLHKMDANV TANCVHPGIV KTRLTRDREG VVTDLVFFLT SKLLKSVPQA AATTCYVATS PRLRNVCGKY FSDCNEARSS
301: KSGSCNLKAQ RLWTASDLLV SPPNSTTNLS HTSF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.