Factsheet for AT5G53100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
plasma membrane 1
cytosol 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029096.1-P	Field mustard	nucleus	81.59	78.57
CDY64354	Canola	cytosol	47.8	76.65
AT5G53090.1	Thale cress	cytosol	76.92	74.67
AT4G27760.1	Thale cress	cytosol	73.35	71.01
VIT_17s0000g00520.t01	Wine grape	cytosol, mitochondrion, peroxisome	70.88	69.54
KRH09442	Soybean	cytosol	67.86	65.52
KRH38907	Soybean	endoplasmic reticulum	67.86	65.34
PGSC0003DMT400026316	Potato	cytosol	66.76	63.12
Solyc03g098460.2.1	Tomato	cytosol	66.48	62.86
GSMUA_Achr7P04190_001	Banana	cytosol	63.19	56.1
Os02t0116500-01	Rice	cytosol	60.44	55.0
TraesCS6A01G045200.1	Wheat	cytosol	59.62	53.45
TraesCS6D01G051500.1	Wheat	cytosol	59.89	53.3
TraesCS6B01G060600.1	Wheat	cytosol	59.89	53.04
Zm00001d054039_P001	Maize	cytosol	60.16	52.64
EES04360	Sorghum	cytosol	60.44	52.01
Zm00001d014994_P001	Maize	cytosol	60.16	46.01
CDY38726	Canola	cytosol, golgi, plastid	80.77	35.34
AT4G23430.2	Thale cress	plastid	28.85	32.61
AT2G37540.1	Thale cress	cytosol	27.2	30.84
AT4G23420.3	Thale cress	plastid	28.02	30.63
AT4G11410.1	Thale cress	cytosol, mitochondrion	26.37	30.28
AT1G64590.1	Thale cress	plastid	27.75	30.24
AT4G24050.1	Thale cress	cytosol	26.92	29.52
AT5G50130.1	Thale cress	mitochondrion	27.2	29.2
AT5G02540.1	Thale cress	mitochondrion	26.1	28.7
AT5G54190.1	Thale cress	plastid	24.73	22.22
AT4G27440.1	Thale cress	plastid	24.18	21.95
AT1G03630.1	Thale cress	plastid	23.9	21.7

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EntrezGene:835390	ProteinID:AED96303.1	ArrayExpress:AT5G53100	EnsemblPlantsGene:AT5G53100
RefSeq:AT5G53100	TAIR:AT5G53100	RefSeq:AT5G53100-TAIR-G	EnsemblPlants:AT5G53100.1	TAIR:AT5G53100.1	Unigene:At.55519
ProteinID:BAB08413.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	RefSeq:NP_200122.1	PFAM:PF00106	PO:PO:0007611
PO:PO:0009031	PRINTS:PR00080	PRINTS:PR00081	PANTHER:PTHR24320	PANTHER:PTHR24320:SF73	UniProt:Q9FGM6
InterPro:SDR_fam	SUPFAM:SSF51735	UniParc:UPI0000048C5C	SEG:seg	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM6]

Coordinates

chr5:+:21526250..21528323

Molecular Weight (calculated)

40634.4 Da

IEP (calculated)

8.666

GRAVY (calculated)

-0.024

Length

364 amino acids

Sequence
(BLAST)

001: MKKNDGLGWI QWMRGWFNVV QEILLQRIMA SHLQIPFHLP PLNHLTCIVT GSTSGIGSET ARQLAEAGAH VVMAVRNIKA AHELIQQWQT KWSASGEGLP
101: LNIQAMELDL LSLDSVVRFS NAWNARLAPL HVLINNAGMF AMGGAQKFSE DGYEQHMQVN HLAPALLSLL LLPSLIRASR SRIINVNSVM HYVGFVDPND
201: MNFVSGKRKF SSLSAYSSSK LAQVMFNNVL LKKLPLETGI SVVCLSPGVV QTNITRDLPR LVQDLYSALP YFIFSPQEGC RSSLFSATDP QIPNHYQKLK
301: TNEKSVCTLF ISLNCKLTNC SEEAQNVETA NRVWEKTLEL IGLPSDTVER LVEGEVVKCR YRTR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.