Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035220.1-P | Field mustard | cytosol | 91.48 | 91.48 |
| CDX86777 | Canola | cytosol | 91.48 | 91.48 |
| CDY13264 | Canola | cytosol | 90.85 | 90.85 |
| VIT_02s0025g03380.t01 | Wine grape | cytosol | 74.76 | 75.24 |
| KRH59919 | Soybean | cytosol, plastid | 73.19 | 73.65 |
| KRH41194 | Soybean | cytosol, plastid | 72.56 | 73.02 |
| Solyc08g081200.2.1 | Tomato | cytosol | 71.29 | 71.75 |
| PGSC0003DMT400032133 | Potato | cytosol | 70.98 | 71.43 |
| GSMUA_AchrUn_... | Banana | cytosol | 70.03 | 70.93 |
| AT4G23430.2 | Thale cress | plastid | 70.98 | 69.88 |
| Solyc08g008060.1.1 | Tomato | cytosol | 65.93 | 66.35 |
| EER96376 | Sorghum | mitochondrion, plastid | 65.62 | 65.82 |
| AT4G23420.3 | Thale cress | plastid | 69.09 | 65.77 |
| Os09t0570300-01 | Rice | plasma membrane | 65.3 | 65.51 |
| TraesCS4D01G003200.1 | Wheat | golgi | 64.98 | 65.19 |
| TraesCS4B01G002900.1 | Wheat | golgi | 64.67 | 64.87 |
| TraesCS4D01G002700.2 | Wheat | mitochondrion, plastid | 64.35 | 64.76 |
| TraesCS4A01G311400.1 | Wheat | mitochondrion, plastid | 64.35 | 64.56 |
| PGSC0003DMT400014810 | Potato | mitochondrion | 49.84 | 64.49 |
| TraesCS4B01G003400.1 | Wheat | plastid | 64.04 | 64.44 |
| GSMUA_Achr2P18620_001 | Banana | plastid | 64.04 | 64.24 |
| TraesCS4D01G003400.2 | Wheat | mitochondrion | 64.04 | 63.04 |
| Zm00001d047150_P003 | Maize | plastid | 59.31 | 59.68 |
| OQU92195 | Sorghum | cytosol | 59.31 | 59.68 |
| EER91987 | Sorghum | plastid | 58.68 | 59.42 |
| TraesCS5B01G461100.1 | Wheat | mitochondrion, plastid | 21.14 | 58.26 |
| OQU92191 | Sorghum | plastid | 57.1 | 57.83 |
| TraesCS1B01G221200.1 | Wheat | cytosol | 57.41 | 57.78 |
| TraesCS4A01G492800.1 | Wheat | mitochondrion, plastid | 20.82 | 57.39 |
| Os10t0548000-02 | Rice | cytosol, peroxisome, plastid | 57.73 | 57.37 |
| Os10t0547900-01 | Rice | cytosol | 56.78 | 57.32 |
| Zm00001d019754_P001 | Maize | mitochondrion, plastid | 63.72 | 57.22 |
| TraesCS1A01G207500.1 | Wheat | cytosol | 56.78 | 57.14 |
| Os04t0291100-01 | Rice | mitochondrion | 56.47 | 57.01 |
| TraesCS1D01G210800.1 | Wheat | plastid | 56.78 | 56.6 |
| TraesCS3B01G220800.1 | Wheat | mitochondrion, plastid | 20.5 | 56.52 |
| Zm00001d029840_P003 | Maize | plastid | 57.73 | 54.79 |
| Zm00001d025129_P001 | Maize | mitochondrion | 40.06 | 54.04 |
| AT2G37540.1 | Thale cress | cytosol | 53.0 | 52.34 |
| AT5G02540.1 | Thale cress | mitochondrion | 54.26 | 51.96 |
| AT4G24050.1 | Thale cress | cytosol | 44.8 | 42.77 |
| AT1G64590.1 | Thale cress | plastid | 44.48 | 42.22 |
| AT5G50130.1 | Thale cress | mitochondrion | 43.85 | 41.0 |
| AT5G53100.1 | Thale cress | cytosol, golgi, mitochondrion, plasma membrane | 30.28 | 26.37 |
| AT5G53090.1 | Thale cress | cytosol | 30.28 | 25.6 |
| AT4G27760.1 | Thale cress | cytosol | 29.97 | 25.27 |
| AT4G27440.1 | Thale cress | plastid | 31.55 | 24.94 |
| AT1G03630.1 | Thale cress | plastid | 30.6 | 24.19 |
| AT5G54190.1 | Thale cress | plastid | 29.34 | 22.96 |
Protein Annotations
| MapMan:23.1.3.5.1 | Gene3D:3.40.50.720 | EntrezGene:826745 | ProteinID:AEE83009.1 | ArrayExpress:AT4G11410 | EnsemblPlantsGene:AT4G11410 |
| RefSeq:AT4G11410 | TAIR:AT4G11410 | RefSeq:AT4G11410-TAIR-G | EnsemblPlants:AT4G11410.1 | TAIR:AT4G11410.1 | ProteinID:CAB81242.1 |
| ProteinID:CAB82146.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | RefSeq:NP_192880.1 | PFAM:PF00106 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00081 | PANTHER:PTHR24320 |
| PANTHER:PTHR24320:SF146 | UniProt:Q9LDY7 | InterPro:SDR_fam | SUPFAM:SSF51735 | UniParc:UPI00000A7194 | SEG:seg |
Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LDY7]
Coordinates
chr4:-:6944891..6947413
Molecular Weight (calculated)
34805.5 Da
IEP (calculated)
7.323
GRAVY (calculated)
-0.221
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MWPFWWKGAS GFSARSTAEE VTHGIDGTGL TAIVTGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR DKILKEIPQA KIDVMKLDLS SMASVRSFAS
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.