Factsheet for AT4G27440.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019049.1-P	Field mustard	plastid	92.77	93.47
AT5G54190.1	Thale cress	plastid	88.28	87.41
KRH27209	Soybean	nucleus, plastid	83.29	83.71
Solyc12g013710.1.1	Tomato	extracellular, nucleus, plastid	82.04	82.87
PGSC0003DMT400039734	Potato	plastid	81.8	82.62
PGSC0003DMT400064369	Potato	plastid	81.8	82.41
Solyc10g006900.2.1	Tomato	plastid	81.05	82.28
VIT_19s0014g03160.t01	Wine grape	plastid	80.8	81.82
KRH55334	Soybean	plastid	80.05	80.45
EER94008	Sorghum	plastid	77.81	79.19
Zm00001d013937_P001	Maize	plastid	78.05	79.04
TraesCS2D01G563700.1	Wheat	cytosol	47.38	78.84
Zm00001d032576_P001	Maize	plastid	77.81	78.79
VIT_12s0059g00270.t01	Wine grape	plastid	78.05	78.45
GSMUA_Achr11P...	Banana	plastid	77.06	78.03
PGSC0003DMT400047264	Potato	plastid	77.06	77.64
KRH26074	Soybean	plastid	66.08	77.49
TraesCS1B01G186300.1	Wheat	plastid	76.06	77.22
GSMUA_Achr3P14270_001	Banana	plastid	74.31	77.0
HORVU1Hr1G044680.1	Barley	plastid	75.81	76.96
Solyc07g054210.2.1	Tomato	plastid	76.56	76.94
AT1G03630.1	Thale cress	plastid	76.56	76.56
Os10t0496900-02	Rice	plastid	76.31	76.12
Os04t0678700-01	Rice	plastid	71.07	73.64
GSMUA_Achr7P04280_001	Banana	plastid	73.07	73.62
TraesCS2A01G590600.1	Wheat	plastid	70.82	73.2
TraesCS1A01G171000.1	Wheat	golgi, plastid	76.06	73.14
TraesCS2B01G593000.1	Wheat	plastid	70.57	72.94
TraesCS2D01G563600.1	Wheat	golgi, plastid	70.57	72.94
TraesCS1D01G168700.2	Wheat	plastid	75.81	72.9
EES11656	Sorghum	plastid	69.33	72.21
Zm00001d001820_P001	Maize	plastid	68.83	71.32
CDX92832	Canola	plastid	93.02	58.56
CDY29840	Canola	plastid	92.27	58.45
HORVU4Hr1G073090.1	Barley	plastid	19.7	56.43
HORVU2Hr1G006120.3	Barley	plastid	16.96	55.74
HORVU2Hr1G119050.2	Barley	mitochondrion	50.87	54.4
HORVU5Hr1G104070.1	Barley	plastid	17.21	53.91
HORVU2Hr1G020490.1	Barley	plastid	20.95	51.85
AT4G23430.2	Thale cress	plastid	25.69	31.99
AT4G11410.1	Thale cress	cytosol, mitochondrion	24.94	31.55
AT4G23420.3	Thale cress	plastid	25.19	30.33
AT2G37540.1	Thale cress	cytosol	24.19	30.22
AT1G64590.1	Thale cress	plastid	23.94	28.74
AT5G02540.1	Thale cress	mitochondrion	23.44	28.4
AT4G24050.1	Thale cress	cytosol	23.44	28.31
AT5G50130.1	Thale cress	mitochondrion	21.45	25.37
AT5G53100.1	Thale cress	cytosol, golgi, mitochondrion, plasma membrane	21.95	24.18
AT4G27760.1	Thale cress	cytosol	22.44	23.94
AT5G53090.1	Thale cress	cytosol	21.45	22.93
HORVU2Hr1G119090.2	Barley	plastid	23.44	22.22

Protein Annotations

KEGG:00860+1.3.1.33	Gene3D:3.40.50.720	MapMan:7.12.6.5.1	EntrezGene:828853	UniProt:A0A178V808	ProteinID:AEE85342.1
ProteinID:AEE85343.1	EMBL:AK317009	ArrayExpress:AT4G27440	EnsemblPlantsGene:AT4G27440	RefSeq:AT4G27440	TAIR:AT4G27440
RefSeq:AT4G27440-TAIR-G	EnsemblPlants:AT4G27440.1	TAIR:AT4G27440.1	EMBL:AY042883	EMBL:AY054206	EMBL:AY081465
EMBL:AY087574	Unigene:At.23416	ProteinID:CAB43876.1	ProteinID:CAB81394.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009527	GO:GO:0009534
GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009707	GO:GO:0009719	GO:GO:0009723
GO:GO:0009941	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995	GO:GO:0016020	GO:GO:0016491
GO:GO:0016630	GO:GO:0019904	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	RefSeq:NP_001031731.1	RefSeq:NP_194474.1
ProteinID:OAP01123.1	UniProt:P21218	PFAM:PF00106	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007131	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	Symbol:PORB	PRINTS:PR00081	PANTHER:PTHR44419
PANTHER:PTHR44419:SF3	InterPro:Prochl_reduct	InterPro:SDR_fam	SUPFAM:SSF51735	TIGRFAMs:TIGR01289	EMBL:U29785
UniParc:UPI0000000BA3	SEG:seg	:	:	:	:

Description

PORBProtochlorophyllide reductase B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P21218]

Coordinates

chr4:+:13725546..13727440

Molecular Weight (calculated)

43361.6 Da

IEP (calculated)

9.655

GRAVY (calculated)

-0.198

Length

401 amino acids

Sequence
(BLAST)

001: MALQAASLVS SAFSVRKDAK LNASSSSFKD SSLFGASITD QIKSEHGSSS LRFKREQSLR NLAIRAQTAA TSSPTVTKSV DGKKTLRKGN VVVTGASSGL
101: GLATAKALAE TGKWNVIMAC RDFLKAERAA KSVGMPKDSY TVMHLDLASL DSVRQFVDNF RRTETPLDVL VCNAAVYFPT AKEPTYSAEG FELSVATNHL
201: GHFLLARLLL DDLKKSDYPS KRLIIVGSIT GNTNTLAGNV PPKANLGDLR GLAGGLNGLN SSAMIDGGDF DGAKAYKDSK VCNMLTMQEF HRRFHEETGV
301: TFASLYPGCI ASTGLFREHI PLFRALFPPF QKYITKGYVS ETESGKRLAQ VVSDPSLTKS GVYWSWNNAS ASFENQLSEE ASDVEKARKV WEISEKLVGL
401: A

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.