Factsheet for HORVU1Hr1G044680.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

plastid: 21440687

msms PMID: 21440687 doi

M Plöscher, V Reisinger, LA Eichacker

TRION Pharma GmbH, Munich, Germany.

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G044680.1
HORVU1Hr1G076010.1
HORVU2Hr1G006120.3
HORVU2Hr1G020490.1
HORVU2Hr1G084420.1
HORVU2Hr1G091830.4
HORVU2Hr1G119050.2
HORVU2Hr1G119090.2
HORVU3Hr1G026980.2
HORVU3Hr1G071060.1
HORVU4Hr1G073090.1
HORVU5Hr1G025740.13
HORVU5Hr1G104070.1
HORVU6Hr1G060760.3
HORVU7Hr1G071270.2
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03630.1	HORVU1Hr1G044680.1	AT1G03630.1	21798944
AT1G03630.1	HORVU2Hr1G006120.3	AT1G03630.1	21798944
AT1G03630.1	HORVU2Hr1G020490.1	AT1G03630.1	21798944
AT1G03630.1	HORVU2Hr1G119050.2	AT1G03630.1	21798944
AT1G03630.1	HORVU2Hr1G119090.2	AT1G03630.1	21798944
AT1G03630.1	HORVU4Hr1G073090.1	AT1G03630.1	21798944
AT1G03630.1	HORVU5Hr1G104070.1	AT1G03630.1	21798944
AT1G03630.1	HORVU2Hr1G084420.1	AT1G27300.1	21798944
AT1G03630.1	HORVU1Hr1G076010.1	AT3G16310.1	21798944
AT1G03630.1	HORVU3Hr1G026980.2	AT3G16310.1	21798944
AT1G03630.1	HORVU3Hr1G071060.1	AT3G16310.1	21798944
AT1G03630.1	HORVU2Hr1G091830.4	AT3G60600.1	21798944
AT1G03630.1	HORVU6Hr1G060760.3	AT3G60600.1	21798944
AT1G03630.1	HORVU7Hr1G071270.2	AT3G60600.1	21798944
AT1G03630.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944
AT1G03630.1	HORVU1Hr1G044680.1	AT4G27440.1	21798944
AT1G03630.1	HORVU2Hr1G006120.3	AT4G27440.1	21798944
AT1G03630.1	HORVU2Hr1G020490.1	AT4G27440.1	21798944
AT1G03630.1	HORVU2Hr1G119050.2	AT4G27440.1	21798944
AT1G03630.1	HORVU2Hr1G119090.2	AT4G27440.1	21798944
AT1G03630.1	HORVU4Hr1G073090.1	AT4G27440.1	21798944
AT1G03630.1	HORVU5Hr1G104070.1	AT4G27440.1	21798944
AT1G03630.1	HORVU5Hr1G025740.13	AT5G11980.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G186300.1	Wheat	plastid	98.73	98.73
TraesCS1D01G168700.2	Wheat	plastid	98.73	93.53
TraesCS1A01G171000.1	Wheat	golgi, plastid	98.48	93.29
EER94008	Sorghum	plastid	89.37	89.59
Zm00001d013937_P001	Maize	plastid	88.61	88.38
Zm00001d032576_P001	Maize	plastid	88.61	88.38
Os10t0496900-02	Rice	plastid	88.86	87.31
GSMUA_Achr11P...	Banana	plastid	78.48	78.28
VIT_19s0014g03160.t01	Wine grape	plastid	77.47	77.27
CDX89249	Canola	plastid	77.22	76.83
CDY29311	Canola	plastid	77.22	76.83
Bra026349.1-P	Field mustard	plastid	75.19	76.55
Solyc10g006900.2.1	Tomato	plastid	76.46	76.46
VIT_12s0059g00270.t01	Wine grape	plastid	77.22	76.44
Solyc12g013710.1.1	Tomato	extracellular, nucleus, plastid	76.71	76.32
PGSC0003DMT400039734	Potato	plastid	76.71	76.32
PGSC0003DMT400064369	Potato	plastid	76.71	76.13
AT4G27440.1	Thale cress	plastid	76.96	75.81
KRH27209	Soybean	nucleus, plastid	76.46	75.69
Bra019049.1-P	Field mustard	plastid	75.7	75.13
AT5G54190.1	Thale cress	plastid	76.96	75.06
AT1G03630.1	Thale cress	plastid	75.7	74.56
Bra003004.1-P	Field mustard	plastid	75.7	74.19
KRH55334	Soybean	plastid	74.94	74.19
CDY14325	Canola	plastid	75.7	74.01
Bra033415.1-P	Field mustard	plastid	74.94	74.0
CDY51384	Canola	plastid	74.43	73.87
CDY18175	Canola	plastid	74.68	73.75
CDX89877	Canola	plastid	74.68	73.75
Bra030540.1-P	Field mustard	plastid	74.18	73.62
CDY15470	Canola	plastid	74.18	73.62
PGSC0003DMT400047264	Potato	plastid	73.42	72.86
Solyc07g054210.2.1	Tomato	plastid	73.16	72.43
CDX98171	Canola	plastid	63.54	71.92
CDY18309	Canola	plastid	63.29	71.63
KRH26074	Soybean	plastid	61.52	71.05
HORVU4Hr1G073090.1	Barley	plastid	20.25	57.14
HORVU2Hr1G006120.3	Barley	plastid	17.22	55.74
HORVU5Hr1G104070.1	Barley	plastid	17.72	54.69
HORVU2Hr1G119050.2	Barley	mitochondrion	51.65	54.4
HORVU2Hr1G020490.1	Barley	plastid	21.27	51.85
CDY29840	Canola	plastid	75.7	47.24
CDX92832	Canola	plastid	75.7	46.94
HORVU4Hr1G086380.1	Barley	mitochondrion, plastid	22.78	26.01
HORVU3Hr1G013970.6	Barley	plastid	23.29	25.92
HORVU7Hr1G011180.12	Barley	plastid	23.29	25.63
HORVU5Hr1G075530.8	Barley	cytosol, nucleus, plastid	25.06	25.52
HORVU4Hr1G018230.1	Barley	plastid	22.53	22.94
HORVU2Hr1G119090.2	Barley	plastid	24.05	22.46

Protein Annotations

KEGG:00860+1.3.1.33	Gene3D:3.40.50.720	MapMan:7.12.6.5.1	EMBL:AK353904	EMBL:AK359203	EMBL:AK366762
UniProt:F2CQK2	GO:GO:0003674	GO:GO:0003824	GO:GO:0003959	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995
GO:GO:0016491	GO:GO:0016630	GO:GO:0018548	GO:GO:0052690	GO:GO:0055114	EnsemblPlantsGene:HORVU1Hr1G044680
EnsemblPlants:HORVU1Hr1G044680.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00081	PANTHER:PTHR44419	PANTHER:PTHR44419:SF2
InterPro:Prochl_reduct	InterPro:SDR_fam	SUPFAM:SSF51735	TIGRFAMs:TIGR01289	UniParc:UPI0000131F60	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CQK2]

Coordinates

chrchr1H:-:324790777..324792954

Molecular Weight (calculated)

42150.5 Da

IEP (calculated)

9.648

GRAVY (calculated)

-0.083

Length

395 amino acids

Sequence
(BLAST)

001: MALQAATSFL PSALSARKEG AAKDSAFFGV RLADGLKLDA TSLGLRTKRV NTSSVAIRAQ AAAVSAPTAT PASPAGKKTV RTGNAIITGA SSGLGLATAK
101: ALAESGKWHV IMACRDYLKT ARAARAAGMP KGSYTIVHLD LASLDSVRQF VKNVRQLDMP IDVVVCNAAV YQPTAKEPSF TADGFEMSVG VNHLGHFLLA
201: RELLEDLKAS DYPSKRLIIV GSITGNTNTL AGNVPPKANL GDLRGLAAGL NGVGSAAMID GAEFDGAKAY KDSKVCNMLT MQEFHRRYHE ETGVTFASLY
301: PGCIATTGLF REHIPLFRLL FPPFQKYITK GYVSEEEAGK RLAQVVSEPS LTKSGVYWSW NKNSASFENQ LSEEASDTEK ARKVWELSEK LVGLA

Best Arabidopsis Sequence Match ( AT5G54190.1 )
(BLAST)

001: MALQAASLVS SAFSVRKDGK LNASASSSFK ESSLFGVSLS EQSKADFVSS SLRCKREQSL RNNKAIIRAQ AIATSTPSVT KSSLDRKKTL RKGNVVVTGA
101: SSGLGLATAK ALAETGKWHV IMACRDFLKA ERAAQSAGMP KDSYTVMHLD LASLDSVRQF VDNFRRAEMP LDVLVCNAAV YQPTANQPTF TAEGFELSVG
201: INHLGHFLLS RLLIDDLKNS DYPSKRLIIV GSITGNTNTL AGNVPPKANL GDLRGLAGGL NGLNSSAMID GGDFVGAKAY KDSKVCNMLT MQEFHRRFHE
301: DTGITFASLY PGCIATTGLF REHIPLFRTL FPPFQKYITK GYVSESEAGK RLAQVVADPS LTKSGVYWSW NKTSASFENQ LSQEASDVEK ARRVWEVSEK
401: LVGLA

Arabidopsis Description

PORAPORA [Source:UniProtKB/TrEMBL;Acc:A0A178UR02]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.