Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G006120.3 | Barley | plastid | 80.47 | 84.43 |
| HORVU4Hr1G073090.1 | Barley | plastid | 89.84 | 82.14 |
| HORVU2Hr1G020490.1 | Barley | plastid | 89.06 | 70.37 |
| TraesCS2D01G563600.1 | Wheat | golgi, plastid | 92.19 | 30.41 |
| TraesCS2B01G593000.1 | Wheat | plastid | 90.62 | 29.9 |
| TraesCS2A01G590600.1 | Wheat | plastid | 90.62 | 29.9 |
| HORVU2Hr1G119050.2 | Barley | mitochondrion | 79.69 | 27.2 |
| Zm00001d001820_P001 | Maize | plastid | 72.66 | 24.03 |
| Os04t0678700-01 | Rice | plastid | 72.66 | 24.03 |
| EES11656 | Sorghum | plastid | 71.09 | 23.64 |
| GSMUA_Achr7P04280_001 | Banana | plastid | 58.59 | 18.84 |
| Bra026349.1-P | Field mustard | plastid | 57.03 | 18.81 |
| GSMUA_Achr3P14270_001 | Banana | plastid | 56.25 | 18.6 |
| Bra019049.1-P | Field mustard | plastid | 57.81 | 18.59 |
| KRH27209 | Soybean | nucleus, plastid | 57.81 | 18.55 |
| CDX89249 | Canola | plastid | 57.03 | 18.39 |
| CDY29311 | Canola | plastid | 57.03 | 18.39 |
| KRH55334 | Soybean | plastid | 57.03 | 18.3 |
| PGSC0003DMT400039734 | Potato | plastid | 56.25 | 18.14 |
| Solyc12g013710.1.1 | Tomato | extracellular, nucleus, plastid | 56.25 | 18.14 |
| Solyc10g006900.2.1 | Tomato | plastid | 55.47 | 17.97 |
| PGSC0003DMT400064369 | Potato | plastid | 55.47 | 17.84 |
| HORVU1Hr1G044680.1 | Barley | plastid | 54.69 | 17.72 |
| AT5G54190.1 | Thale cress | plastid | 54.69 | 17.28 |
| AT4G27440.1 | Thale cress | plastid | 53.91 | 17.21 |
| VIT_12s0059g00270.t01 | Wine grape | plastid | 53.12 | 17.04 |
| KRH26074 | Soybean | plastid | 45.31 | 16.96 |
| Bra003004.1-P | Field mustard | plastid | 53.12 | 16.87 |
| CDY14325 | Canola | plastid | 53.12 | 16.83 |
| CDY18175 | Canola | plastid | 52.34 | 16.75 |
| VIT_19s0014g03160.t01 | Wine grape | plastid | 51.56 | 16.67 |
| Bra033415.1-P | Field mustard | plastid | 51.56 | 16.5 |
| CDX89877 | Canola | plastid | 51.56 | 16.5 |
| CDY15470 | Canola | plastid | 50.78 | 16.33 |
| PGSC0003DMT400047264 | Potato | plastid | 50.78 | 16.33 |
| Solyc07g054210.2.1 | Tomato | plastid | 50.78 | 16.29 |
| AT1G03630.1 | Thale cress | plastid | 50.78 | 16.21 |
| Bra030540.1-P | Field mustard | plastid | 50.0 | 16.08 |
| CDY51384 | Canola | plastid | 50.0 | 16.08 |
| CDY29840 | Canola | plastid | 57.81 | 11.69 |
| CDX92832 | Canola | plastid | 57.03 | 11.46 |
| CDY18309 | Canola | plastid | 29.69 | 10.89 |
| CDX98171 | Canola | plastid | 29.69 | 10.89 |
| HORVU3Hr1G013970.6 | Barley | plastid | 19.53 | 7.04 |
| HORVU4Hr1G086380.1 | Barley | mitochondrion, plastid | 18.75 | 6.94 |
| HORVU5Hr1G075530.8 | Barley | cytosol, nucleus, plastid | 19.53 | 6.44 |
| HORVU7Hr1G011180.12 | Barley | plastid | 15.62 | 5.57 |
| HORVU4Hr1G018230.1 | Barley | plastid | 15.62 | 5.15 |
| TraesCS2D01G563700.1 | Wheat | cytosol | 2.34 | 1.24 |
| HORVU2Hr1G119090.2 | Barley | plastid | 1.56 | 0.47 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G104070.1 | EnsemblPlantsGene:HORVU5Hr1G104070 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016630 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | InterPro:Prochl_reduct | KEGG:00860+1.3.1.33 |
| PANTHER:PTHR44419 | PANTHER:PTHR44419:SF2 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI000B46795A | UniProt:A0A287SJX5 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:618156725..618157593
Molecular Weight (calculated)
12684.6 Da
IEP (calculated)
11.331
GRAVY (calculated)
0.217
Length
128 amino acids
Sequence
(BLAST)
(BLAST)
001: MALQLLPSTL SVPKKGTSMG AVAVKDTAAF LGVSSKVKKA SLAVRTQVAT VPSPVTTSPG STASSPSGKK TLRQGVVVIT GASSGLGLAA AKALAETGKW
101: HVVMACRDFL KASKAAGMAD TSKGGSKI
101: HVVMACRDFL KASKAAGMAD TSKGGSKI
001: MALQAAYSLL PSTISIQKEG KFNASLKETT FTGSSFSNHL RAEKISTLLT IKEQRRQKPR FSTGIRAQTV TATPPANEAS PEQKKTERKG TAVITGASSG
101: LGLATAKALA DTGKWHVIMA CRNFLKAEKA ARSVGMSKED YTVMHLDLAS LESVKQFVEN FRRTEQPLDV LVCNAAVYQP TAKEPSFTAE GFEISVGTNH
201: LGHFLLSRLL LDDLKKSDYP SKRMIIVGSI TGNTNTLAGN VPPKANLGDL RGLASGLNGQ NSSMIDGGEF DGAKAYKDSK VCNMLTMQEL HRRYHEETGV
301: TFASLYPGCI ATTGLFREHI PLFRLLFPPF QKYITKGYVS EEEAGKRLAQ VVSDPSLGKS GVYWSWNNNS SSFENQLSKE ASDAEKAKKL WEVSEKLVGL
401: A
101: LGLATAKALA DTGKWHVIMA CRNFLKAEKA ARSVGMSKED YTVMHLDLAS LESVKQFVEN FRRTEQPLDV LVCNAAVYQP TAKEPSFTAE GFEISVGTNH
201: LGHFLLSRLL LDDLKKSDYP SKRMIIVGSI TGNTNTLAGN VPPKANLGDL RGLASGLNGQ NSSMIDGGEF DGAKAYKDSK VCNMLTMQEL HRRYHEETGV
301: TFASLYPGCI ATTGLFREHI PLFRLLFPPF QKYITKGYVS EEEAGKRLAQ VVSDPSLGKS GVYWSWNNNS SSFENQLSKE ASDAEKAKKL WEVSEKLVGL
401: A
Arabidopsis Description
PORCProtochlorophyllide reductase C, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O48741]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.