Factsheet for Bra019049.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026349.1-P	Field mustard	plastid	93.72	96.13
AT4G27440.1	Thale cress	plastid	93.47	92.77
Bra003004.1-P	Field mustard	plastid	85.93	84.86
KRH27209	Soybean	nucleus, plastid	84.17	83.96
Solyc12g013710.1.1	Tomato	extracellular, nucleus, plastid	82.16	82.37
PGSC0003DMT400039734	Potato	plastid	81.91	82.12
Solyc10g006900.2.1	Tomato	plastid	81.41	82.03
PGSC0003DMT400064369	Potato	plastid	81.66	81.66
VIT_19s0014g03160.t01	Wine grape	plastid	81.16	81.57
KRH55334	Soybean	plastid	80.15	79.95
TraesCS2D01G563700.1	Wheat	cytosol	47.99	79.25
VIT_12s0059g00270.t01	Wine grape	plastid	78.64	78.45
EER94008	Sorghum	plastid	77.64	78.43
Zm00001d013937_P001	Maize	plastid	77.89	78.28
Zm00001d032576_P001	Maize	plastid	77.64	78.03
PGSC0003DMT400047264	Potato	plastid	77.39	77.39
Solyc07g054210.2.1	Tomato	plastid	77.14	76.94
KRH26074	Soybean	plastid	66.08	76.9
GSMUA_Achr3P14270_001	Banana	plastid	74.62	76.74
GSMUA_Achr11P...	Banana	plastid	75.63	76.01
Bra033415.1-P	Field mustard	plastid	76.38	76.0
TraesCS1B01G186300.1	Wheat	plastid	75.38	75.95
HORVU1Hr1G044680.1	Barley	plastid	75.13	75.7
Bra030540.1-P	Field mustard	plastid	75.38	75.38
TraesCS2A01G590600.1	Wheat	plastid	72.61	74.48
TraesCS2B01G593000.1	Wheat	plastid	72.61	74.48
Os04t0678700-01	Rice	plastid	72.36	74.42
Os10t0496900-02	Rice	plastid	75.13	74.38
TraesCS2D01G563600.1	Wheat	golgi, plastid	72.36	74.23
GSMUA_Achr7P04280_001	Banana	plastid	73.37	73.37
EES11656	Sorghum	plastid	70.85	73.25
Zm00001d001820_P001	Maize	plastid	70.6	72.61
TraesCS1A01G171000.1	Wheat	golgi, plastid	75.38	71.94
TraesCS1D01G168700.2	Wheat	plastid	75.13	71.7
CDY29840	Canola	plastid	99.5	62.56
HORVU4Hr1G073090.1	Barley	plastid	21.11	60.0
HORVU2Hr1G006120.3	Barley	plastid	18.34	59.84
HORVU5Hr1G104070.1	Barley	plastid	18.59	57.81
HORVU2Hr1G119050.2	Barley	mitochondrion	52.51	55.73
HORVU2Hr1G020490.1	Barley	plastid	22.61	55.56
Bra013690.1-P	Field mustard	plastid	27.14	33.33
Bra035220.1-P	Field mustard	cytosol	26.38	33.12
Bra020819.1-P	Field mustard	cytosol, plastid	26.63	32.92
Bra005188.1-P	Field mustard	cytosol	25.88	32.49
Bra017180.1-P	Field mustard	cytosol	25.63	31.78
Bra009580.1-P	Field mustard	mitochondrion	25.13	30.21
Bra005729.1-P	Field mustard	mitochondrion	24.37	29.31
Bra013757.1-P	Field mustard	cytosol	23.87	28.61
Bra019248.1-P	Field mustard	cytosol	23.62	28.31
Bra027706.1-P	Field mustard	plastid	24.12	27.75
Bra027725.1-P	Field mustard	plastid	24.37	27.4
Bra026308.1-P	Field mustard	cytosol, nucleus, peroxisome	23.12	24.66
Bra029096.1-P	Field mustard	nucleus	22.36	23.55
HORVU2Hr1G119090.2	Barley	plastid	23.87	22.46
Bra019028.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	22.86	22.41
Bra022628.1-P	Field mustard	cytosol, mitochondrion	21.36	21.2
Bra037939.1-P	Field mustard	cytosol	22.36	17.91
Bra027724.1-P	Field mustard	cytosol, plastid	0.0	0.0

Protein Annotations

KEGG:00860+1.3.1.33	Gene3D:3.40.50.720	MapMan:7.12.6.5.1	EnsemblPlantsGene:Bra019049	EnsemblPlants:Bra019049.1	EnsemblPlants:Bra019049.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009534	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009719	GO:GO:0009723
GO:GO:0009941	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995	GO:GO:0016020	GO:GO:0016491
GO:GO:0016630	GO:GO:0019904	GO:GO:0055114	UniProt:M4DRA6	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106
PRINTS:PR00081	PANTHER:PTHR44419	PANTHER:PTHR44419:SF3	InterPro:Prochl_reduct	InterPro:SDR_fam	SUPFAM:SSF51735
TIGRFAMs:TIGR01289	UniParc:UPI0002540B2A	SEG:seg	:	:	:

Description

AT4G27440 (E=7e-166) PORB | PORB (PROTOCHLOROPHYLLIDE OXIDOREDUCTASE B); oxidoreductase/ protochlorophyllide reductase

Coordinates

chrA03:+:26561654..26563120

Molecular Weight (calculated)

42859.0 Da

IEP (calculated)

9.627

GRAVY (calculated)

-0.181

Length

398 amino acids

Sequence
(BLAST)

001: MALQVALLVS SAFSVQKDGK VNASSSSFKD SSLFGASITE HGSSSLRFKR EHSSRSVLAV RAQTAATSSP SVTKSSSGGK KTLRKGNVVV TGASSGLGLA
101: TAKALAETGK WHVIMACRDF LKAERAAKSA GMPKDSYTVM HLDLASLDSV RQFVDSFRRS EMPLDVLVCN AAVYFPTAKE PTYSAEGFEL SVATNHLGHF
201: LLSRLLLDDL KKSDYPSKRL IIVGSITGNT NTLAGNVPPK ANLGDLRGLA GGLNGLNSSA MIDGGDFDGA KAYKDSKVCN MLTMQELHRR YHEETGVTFA
301: SLYPGCIAST GLFREHIPLF RTLFPPFQKY ITKGYVSETE SGKRLAQVVS DPSLTKSGVY WSWNKASASF ENELSEEASD VEKARKVWEI SEKLVGLA

Best Arabidopsis Sequence Match ( AT4G27440.1 )
(BLAST)

001: MALQAASLVS SAFSVRKDAK LNASSSSFKD SSLFGASITD QIKSEHGSSS LRFKREQSLR NLAIRAQTAA TSSPTVTKSV DGKKTLRKGN VVVTGASSGL
101: GLATAKALAE TGKWNVIMAC RDFLKAERAA KSVGMPKDSY TVMHLDLASL DSVRQFVDNF RRTETPLDVL VCNAAVYFPT AKEPTYSAEG FELSVATNHL
201: GHFLLARLLL DDLKKSDYPS KRLIIVGSIT GNTNTLAGNV PPKANLGDLR GLAGGLNGLN SSAMIDGGDF DGAKAYKDSK VCNMLTMQEF HRRFHEETGV
301: TFASLYPGCI ASTGLFREHI PLFRALFPPF QKYITKGYVS ETESGKRLAQ VVSDPSLTKS GVYWSWNNAS ASFENQLSEE ASDVEKARKV WEISEKLVGL
401: A

Arabidopsis Description

PORBProtochlorophyllide reductase B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P21218]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.