Factsheet for Bra017180.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18436	Canola	cytosol	99.69	99.69
Bra005188.1-P	Field mustard	cytosol	90.03	91.17
AT2G37540.1	Thale cress	cytosol	84.42	84.42
Bra009580.1-P	Field mustard	mitochondrion	71.96	69.79
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	69.47	69.47
VIT_08s0040g03400.t01	Wine grape	plastid	69.47	68.83
Bra005729.1-P	Field mustard	mitochondrion	70.72	68.58
GSMUA_Achr8P20890_001	Banana	cytosol, mitochondrion, plastid	68.22	68.44
Zm00001d039848_P002	Maize	cytosol, mitochondrion, plastid	67.91	68.12
Solyc10g086390.1.1	Tomato	mitochondrion	68.54	68.11
KRH32305	Soybean	plastid	68.54	68.11
KRH19708	Soybean	nucleus	68.22	67.8
GSMUA_Achr7P15240_001	Banana	plastid	68.22	67.59
EES02479	Sorghum	cytosol, plastid	67.29	67.5
PGSC0003DMT400049292	Potato	mitochondrion	67.91	67.49
GSMUA_Achr11P...	Banana	cytosol	67.91	67.28
KRH67540	Soybean	nucleus	66.98	66.56
Solyc09g010510.2.1	Tomato	cytosol, mitochondrion, plastid	66.36	66.56
PGSC0003DMT400022813	Potato	mitochondrion	66.36	66.56
KRG95813	Soybean	nucleus	66.67	66.25
TraesCS3B01G091800.3	Wheat	cytosol	66.04	66.25
Os01t0151700-01	Rice	cytosol	65.73	65.73
TraesCS5D01G287000.1	Wheat	plastid	64.8	64.6
TraesCS5B01G279400.1	Wheat	plastid	64.8	64.6
TraesCS5A01G280400.1	Wheat	plastid	64.17	63.98
HORVU3Hr1G013970.6	Barley	plastid	65.11	58.87
TraesCS3A01G077400.2	Wheat	cytosol, plastid	64.17	58.86
Bra020819.1-P	Field mustard	cytosol, plastid	57.32	57.14
Bra035220.1-P	Field mustard	cytosol	54.83	55.52
Bra013690.1-P	Field mustard	plastid	54.83	54.32
Zm00001d039397_P001	Maize	cytosol	40.81	53.91
HORVU5Hr1G075530.8	Barley	cytosol, nucleus, plastid	64.17	53.09
TraesCS3D01G077500.2	Wheat	cytosol, plastid	56.7	52.0
Bra019248.1-P	Field mustard	cytosol	51.71	50.0
Bra013757.1-P	Field mustard	cytosol	50.78	49.1
Bra027706.1-P	Field mustard	plastid	49.22	45.66
Bra027725.1-P	Field mustard	plastid	49.53	44.92
Bra037939.1-P	Field mustard	cytosol	48.6	31.39
Bra026308.1-P	Field mustard	cytosol, nucleus, peroxisome	31.46	27.08
Bra029096.1-P	Field mustard	nucleus	31.15	26.45
Bra026349.1-P	Field mustard	plastid	31.15	25.77
Bra033415.1-P	Field mustard	plastid	32.09	25.75
Bra019049.1-P	Field mustard	plastid	31.78	25.63
Bra030540.1-P	Field mustard	plastid	31.46	25.38
Bra003004.1-P	Field mustard	plastid	31.46	25.06
Bra019028.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	31.15	24.63
Bra022628.1-P	Field mustard	cytosol, mitochondrion	30.22	24.19
Bra027724.1-P	Field mustard	cytosol, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Bra017180.1	EnsemblPlants:Bra017180.1-P	EnsemblPlantsGene:Bra017180	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF81	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	UniParc:UPI000254460E	UniProt:M4DKZ9	MapMan:35.1	:	:

Description

AT2G37540 (E=3e-133) | short-chain dehydrogenase/reductase (SDR) family protein

Coordinates

chrA04:-:16178367..16180698

Molecular Weight (calculated)

34750.7 Da

IEP (calculated)

8.456

GRAVY (calculated)

-0.015

Length

321 amino acids

Sequence
(BLAST)

001: MGIYGMVTGK AGKSGFGSAS TAEDVTQSID ANHLTAIITG GTSGIGLEAA RVLGLRGAHV IIAARNTKAA NESKEMILKM NPNARIDYLQ LDLSSIKSVR
101: SFVHQFLALN LPLNILINNA GVMFCPFQLT EDGIESQFAT NHIGHFLLTN LLLDKMKSSA RESGIEGRIV NLSSVAHTYT YTEGIKFDSI NDPDTYSEKK
201: AYGQSKLANL LHSNALSRKL QEEGVNITVN SVHPGLVTTN LFRHSGLGMS VFKAMSFFLW KNIPQGAATT CYVALHPSLK GVTGKYFADC NITTPSKFAT
301: DKSLADELWD FSIKLIDSLP N

Best Arabidopsis Sequence Match ( AT2G37540.1 )
(BLAST)

001: MGIYGVMTGK KGKSGFGSAS TAEDVTQAID ASHLTAIITG GTSGIGLEAA RVLAMRGAHV IIAARNPKAA NESKEMILQM NPNARVDYLQ IDVSSIKSVR
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:O80924]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.