CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 3
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039848_P002	Maize	cytosol, mitochondrion, plastid	97.19	97.19
Os01t0151700-01	Rice	cytosol	86.56	86.29
TraesCS3B01G091800.3	Wheat	cytosol	85.0	85.0
TraesCS5B01G279400.1	Wheat	plastid	84.38	83.85
TraesCS5D01G287000.1	Wheat	plastid	84.06	83.54
TraesCS5A01G280400.1	Wheat	plastid	83.12	82.61
TraesCS3A01G077400.2	Wheat	cytosol, plastid	84.38	77.14
GSMUA_Achr8P20890_001	Banana	cytosol, mitochondrion, plastid	75.94	75.94
HORVU3Hr1G013970.6	Barley	plastid	84.06	75.77
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	74.38	74.14
PGSC0003DMT400049292	Potato	mitochondrion	74.38	73.68
Solyc10g086390.1.1	Tomato	mitochondrion	73.75	73.06
Zm00001d039397_P001	Maize	cytosol	55.31	72.84
GSMUA_Achr7P15240_001	Banana	plastid	73.75	72.84
GSMUA_Achr11P...	Banana	cytosol	71.88	70.99
VIT_08s0040g03400.t01	Wine grape	plastid	71.88	70.99
Solyc09g010510.2.1	Tomato	cytosol, mitochondrion, plastid	70.0	70.0
PGSC0003DMT400022813	Potato	mitochondrion	69.38	69.38
HORVU5Hr1G075530.8	Barley	cytosol, nucleus, plastid	83.12	68.56
KRG95813	Soybean	nucleus	68.75	68.11
KRH67540	Soybean	nucleus	68.44	67.8
Bra017180.1-P	Field mustard	cytosol	67.5	67.29
CDY18436	Canola	cytosol	67.19	66.98
TraesCS3D01G077500.2	Wheat	cytosol, plastid	73.12	66.86
CDX81232	Canola	cytosol	66.88	66.67
KRH19708	Soybean	nucleus	67.19	66.56
KRH32305	Soybean	plastid	66.88	66.25
Bra005188.1-P	Field mustard	cytosol	65.0	65.62
CDX74954	Canola	cytosol	65.31	65.31
CDY52816	Canola	cytosol	65.31	65.31
CDY68648	Canola	cytosol	42.5	65.07
CDY52817	Canola	cytosol	65.0	65.0
CDX88292	Canola	cytosol	31.88	64.97
CDY10440	Canola	plastid	65.94	64.92
CDY40365	Canola	mitochondrion	66.88	64.65
Bra009580.1-P	Field mustard	mitochondrion	66.56	64.35
AT5G02540.1	Thale cress	mitochondrion	65.94	63.75
AT2G37540.1	Thale cress	cytosol	63.75	63.55
CDY11217	Canola	mitochondrion	65.62	63.44
Bra005729.1-P	Field mustard	mitochondrion	65.62	63.44
CDY55418	Canola	cytosol	55.94	59.87
EER96376	Sorghum	mitochondrion, plastid	57.19	57.91
EER91987	Sorghum	plastid	56.56	57.83
OQU92195	Sorghum	cytosol	56.88	57.78
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	24.06	56.2
OQU92191	Sorghum	plastid	54.69	55.91
EES08101	Sorghum	cytosol	56.88	49.59
OQU93381	Sorghum	mitochondrion	49.38	44.51
EER87765	Sorghum	mitochondrion	49.38	43.89
EES11656	Sorghum	plastid	31.56	26.23
EER94008	Sorghum	plastid	28.75	23.35
EES04360	Sorghum	cytosol	30.31	22.93

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EntrezGene:8073299	UniProt:C5XPZ4	EnsemblPlants:EES02479	ProteinID:EES02479
ProteinID:EES02479.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	ProteinID:KXG31873.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081
PANTHER:PTHR24320	PANTHER:PTHR24320:SF81	InterPro:SDR_fam	EnsemblPlantsGene:SORBI_3003G070600	SUPFAM:SSF51735	unigene:Sbi.9569
UniParc:UPI0001A84ACC	RefSeq:XP_002457359.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:6023250..6028596

Molecular Weight (calculated)

34670.0 Da

IEP (calculated)

9.800

GRAVY (calculated)

-0.034

Length

320 amino acids

Sequence
(BLAST)

001: MGILSLITGK AGASGFGSAS TAEQVTDGVD ASRLTVVITG GASGIGLETS RVFALRGAHV VIAARNTEAA SEARKTIMEK NPTARIDVLK LDLSSLKSVR
101: AFADQFNSMK LPLNILINNA GVMFCPFQLS KDGVEMQFAT NHLGHFLLTN LLLDTMKATA KSTGIEGRIV NLSSVAHHHT YPKGIDFDKL NDEKIYNDKM
201: AYGQSKLANL LHANELSRRL KAEGANITVN SVHPGLIMTN LMRHSFVLMK VLQVATYILW KNVPQGAATT CYAGLNPQLK GVTGKYFADC NVEKTSKLAR
301: SEELAKQLWD FSEELIKSAK

Best Arabidopsis Sequence Match ( AT2G37540.1 )
(BLAST)

001: MGIYGVMTGK KGKSGFGSAS TAEDVTQAID ASHLTAIITG GTSGIGLEAA RVLAMRGAHV IIAARNPKAA NESKEMILQM NPNARVDYLQ IDVSSIKSVR
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:O80924]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.