CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55418	Canola	cytosol	91.87	64.21
CDY11217	Canola	mitochondrion	99.04	62.54
CDY40365	Canola	mitochondrion	94.26	59.52
AT5G02540.1	Thale cress	mitochondrion	93.78	59.21
CDY10440	Canola	plastid	89.95	57.85
CDY52817	Canola	cytosol	71.29	46.56
CDY52816	Canola	cytosol	71.29	46.56
CDX81232	Canola	cytosol	71.29	46.42
CDY18436	Canola	cytosol	71.29	46.42
CDX74954	Canola	cytosol	70.81	46.25
KRH19708	Soybean	nucleus	70.81	45.82
GSMUA_Achr8P20890_001	Banana	cytosol, mitochondrion, plastid	69.86	45.62
VIT_08s0040g03400.t01	Wine grape	plastid	70.33	45.37
Solyc10g086390.1.1	Tomato	mitochondrion	69.86	45.2
GSMUA_Achr7P15240_001	Banana	plastid	69.86	45.06
PGSC0003DMT400049292	Potato	mitochondrion	69.38	44.89
KRH32305	Soybean	plastid	69.38	44.89
PGSC0003DMT400022813	Potato	mitochondrion	68.42	44.69
Solyc09g010510.2.1	Tomato	cytosol, mitochondrion, plastid	67.94	44.38
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	67.94	44.24
GSMUA_Achr11P...	Banana	cytosol	67.94	43.83
KRH67540	Soybean	nucleus	66.99	43.34
KRG95813	Soybean	nucleus	66.51	43.03
Zm00001d039848_P002	Maize	cytosol, mitochondrion, plastid	65.55	42.81
Zm00001d039397_P001	Maize	cytosol	49.76	42.8
EES02479	Sorghum	cytosol, plastid	65.07	42.5
TraesCS3B01G091800.3	Wheat	cytosol	64.11	41.88
Os01t0151700-01	Rice	cytosol	64.11	41.74
TraesCS5B01G279400.1	Wheat	plastid	60.77	39.44
TraesCS5D01G287000.1	Wheat	plastid	60.77	39.44
CDY69917	Canola	endoplasmic reticulum	56.94	39.02
TraesCS5A01G280400.1	Wheat	plastid	59.81	38.82
CDY10884	Canola	plastid	57.42	37.27
TraesCS3A01G077400.2	Wheat	cytosol, plastid	62.2	37.14
HORVU3Hr1G013970.6	Barley	plastid	61.72	36.34
CDX76338	Canola	cytosol, plastid	55.5	36.02
CDY13264	Canola	cytosol	54.55	35.96
CDX86777	Canola	cytosol	54.07	35.65
CDY44096	Canola	mitochondrion, plastid	57.89	33.52
HORVU5Hr1G075530.8	Barley	cytosol, nucleus, plastid	59.81	32.22
TraesCS3D01G077500.2	Wheat	cytosol, plastid	51.67	30.86
CDY10985	Canola	cytosol	45.93	28.92
CDY50440	Canola	mitochondrion	45.93	28.32
CDX76323	Canola	cytosol	44.5	28.01
CDX71585	Canola	mitochondrion	42.58	26.25
CDY53433	Canola	plastid	42.58	25.57
CDY64354	Canola	cytosol	22.01	20.26
CDY72089	Canola	cytosol	16.75	17.41
CDY72311	Canola	cytosol	16.75	17.33
CDY18309	Canola	plastid	27.27	16.33
CDX98171	Canola	plastid	26.79	16.05
CDY15470	Canola	plastid	29.19	15.33
CDY51384	Canola	plastid	29.19	15.33
CDY29311	Canola	plastid	28.71	15.11
CDX89249	Canola	plastid	28.71	15.11
CDY53896	Canola	plastid	14.35	15.0
CDY18175	Canola	plastid	28.71	15.0
CDX89877	Canola	plastid	28.71	15.0
CDY37755	Canola	mitochondrion, plastid	43.06	14.45
CDX92838	Canola	cytosol	21.53	14.06
CDX88292	Canola	cytosol	10.53	14.01
CDY14325	Canola	plastid	26.79	13.86
CDY19025	Canola	cytosol	23.92	13.4
CDX89228	Canola	cytosol, nucleus, peroxisome	23.92	13.4
CDY29859	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	21.53	12.3
CDX96191	Canola	mitochondrion	22.49	10.68
CDY27027	Canola	golgi, mitochondrion, nucleus	22.49	10.49
CDY08387	Canola	cytosol, nucleus, plastid	42.11	9.88
CDY47833	Canola	cytosol, nucleus, plastid	41.63	9.76
CDY29840	Canola	plastid	29.19	9.64
CDX92832	Canola	plastid	28.71	9.42
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	3.83	5.84
CDY38726	Canola	cytosol, golgi, plastid	22.49	5.65
CDY70072	Canola	cytosol	1.44	1.8

Protein Annotations

EnsemblPlants:CDY68648	EnsemblPlantsGene:GSBRNA2T00076534001	Gene3D:3.40.50.720	GO:A0A078JMB3	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF81	PFAM:PF00106	PRINTS:PR00081	ProteinID:CDY68648	ProteinID:CDY68648.1
SUPFAM:SSF51735	UniParc:UPI0004EDAD67	UniProt:A0A078JMB3	MapMan:35.1	:	:

Description

BnaC03g71290DBnaC03g71290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMB3]

Coordinates

chrLK037718:-:3802..5181

Molecular Weight (calculated)

23769.6 Da

IEP (calculated)

7.909

GRAVY (calculated)

-0.102

Length

209 amino acids

Sequence
(BLAST)

001: MFCPYQLSED EIELQFATNH IGHFLLTNLL LDTMKTTAKT SGVEGRILNL SSIAHIYTYK EGIKFDSIND ICCYSDKRAY GQSKLANILH ANELSRQLQE
101: EGVNITVNSV HPGLILTNLF QHTALLMRFL KFFSFYLWKN IPQGAATTCY VALHPTLKGV TRKYFADCNE VTPSKLARDE TLAQKLWDFS VKLINSVSKK
201: NYLGFEDTI

Best Arabidopsis Sequence Match ( AT2G37540.1 )
(BLAST)

001: MGIYGVMTGK KGKSGFGSAS TAEDVTQAID ASHLTAIITG GTSGIGLEAA RVLAMRGAHV IIAARNPKAA NESKEMILQM NPNARVDYLQ IDVSSIKSVR
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:O80924]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.