CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 1
plastid 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plastid
Any Predictor:	cytosol, golgi, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70072	Canola	cytosol	18.87	94.01
CDY64354	Canola	cytosol	25.6	93.83
AT5G53100.1	Thale cress	cytosol, golgi, mitochondrion, plasma membrane	35.34	80.77
CDX92838	Canola	cytosol	27.4	71.25
CDY19025	Canola	cytosol	31.25	69.71
CDX89228	Canola	cytosol, nucleus, peroxisome	31.13	69.44
VIT_17s0000g00520.t01	Wine grape	cytosol, mitochondrion, peroxisome	30.53	68.46
KRH09442	Soybean	cytosol	29.33	64.72
KRH38907	Soybean	endoplasmic reticulum	28.97	63.76
PGSC0003DMT400026316	Potato	cytosol	28.97	62.6
Solyc03g098460.2.1	Tomato	cytosol	28.85	62.34
CDY29859	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	26.92	61.2
CDY27027	Canola	golgi, mitochondrion, nucleus	32.45	60.27
CDX96191	Canola	mitochondrion	31.49	59.55
GSMUA_Achr7P04190_001	Banana	cytosol	28.12	57.07
Os02t0116500-01	Rice	cytosol	25.48	53.0
TraesCS6A01G045200.1	Wheat	cytosol	25.36	51.97
TraesCS6D01G051500.1	Wheat	cytosol	25.48	51.83
TraesCS6B01G060600.1	Wheat	cytosol	25.48	51.58
Zm00001d054039_P001	Maize	cytosol	25.0	50.0
EES04360	Sorghum	cytosol	25.0	49.17
Zm00001d014994_P001	Maize	cytosol	25.12	43.91
CDX88292	Canola	cytosol	7.09	37.58
CDY53896	Canola	plastid	8.53	35.5
CDY72089	Canola	cytosol	8.17	33.83
CDY72311	Canola	cytosol	8.17	33.66
CDX76338	Canola	cytosol, plastid	12.5	32.3
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	5.29	32.12
CDY69917	Canola	endoplasmic reticulum	11.66	31.8
CDX81232	Canola	cytosol	12.02	31.15
CDY10884	Canola	plastid	12.02	31.06
CDY18436	Canola	cytosol	11.9	30.84
CDY52817	Canola	cytosol	11.54	30.0
CDY10985	Canola	cytosol	11.9	29.82
CDX74954	Canola	cytosol	11.42	29.69
CDY52816	Canola	cytosol	11.42	29.69
CDX76323	Canola	cytosol	11.78	29.52
CDY13264	Canola	cytosol	11.18	29.34
CDX86777	Canola	cytosol	11.06	29.02
CDY50440	Canola	mitochondrion	11.66	28.61
CDY53433	Canola	plastid	11.9	28.45
CDY10440	Canola	plastid	10.94	28.0
CDY44096	Canola	mitochondrion, plastid	12.14	27.98
CDY40365	Canola	mitochondrion	10.94	27.49
CDY11217	Canola	mitochondrion	10.58	26.59
CDY55418	Canola	cytosol	9.5	26.42
CDX89249	Canola	plastid	10.82	22.67
CDY29311	Canola	plastid	10.82	22.67
CDY68648	Canola	cytosol	5.65	22.49
CDY18175	Canola	plastid	10.58	22.0
CDY14325	Canola	plastid	10.58	21.78
CDX89877	Canola	plastid	10.46	21.75
CDY15470	Canola	plastid	10.34	21.61
CDY51384	Canola	plastid	10.34	21.61
CDX71585	Canola	mitochondrion	8.65	21.24
CDY18309	Canola	plastid	8.29	19.77
CDX98171	Canola	plastid	8.29	19.77
CDY37755	Canola	mitochondrion, plastid	11.54	15.41
CDY29840	Canola	plastid	10.94	14.38
CDX92832	Canola	plastid	10.82	14.13
CDY08387	Canola	cytosol, nucleus, plastid	14.66	13.69
CDY47833	Canola	cytosol, nucleus, plastid	14.66	13.69

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.40.50.720	Gene3D:3.60.40.10	MapMan:35.1	GO:A0A078HM99
UniProt:A0A078HM99	EnsemblPlants:CDY38726	ProteinID:CDY38726	ProteinID:CDY38726.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	GO:GO:0046872
EnsemblPlantsGene:GSBRNA2T00066506001	InterPro:IPR001932	InterPro:IPR036457	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PFAM:PF00481
InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PRINTS:PR00080	PRINTS:PR00081
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF223	InterPro:SDR_fam	SMART:SM00331
SMART:SM00332	SUPFAM:SSF51735	SUPFAM:SSF81606	UniParc:UPI0004EF4133	SEG:seg	:

Description

BnaC03g15230DBnaC03g15230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HM99]

Coordinates

chrLK032431:+:90497..97863

Molecular Weight (calculated)

92287.4 Da

IEP (calculated)

6.677

GRAVY (calculated)

-0.283

Length

832 amino acids

Sequence
(BLAST)

001: MKRMMSNEIV SSNKTKKDGL RWMVWLRGWV NVLQEILLQR IMASHLHNPF PLPPLNNLTC IVTGSTSGIG SETARQLAEA GAHVVMAVRN IKAAHELIQQ
101: WQTKYYSSGK RHPLNIQAME LDLLSLNSVM RFSNAWNARL SPLHVLINNA GMFSMGGAQK FSEDGYEQHL QVNHLAPALL SLLLLPSLIR ASQSRIISVN
201: SVIHYVGFVD PNDLNFVSGK RKFSSLEGYS SSKLAQVMFN NVLSKRLPLE TGISVLCLSP GVVQTNITRD LPRFIQDIYS ALPYISYSPQ EGCRSSVFSA
301: TDSQIQIYCE KLKTDKKSVC AFISQSCQPT NSSEEAHNVE TSSKVWEKTI ELIGLPLNSL EMLIEGEEIW CRMLASKMTS LNANRNGFEK GMKTIIFHGS
401: SQKLIRAINS FLPSLRFRSV LLHWTCLMVC SSLVRSLIVQ AGRTRIGVFA QGRHQLNLTN KTLSVGFGFR TTAAKMMMVD SSTGEKRVEM FDIPKEKVDD
501: GGYIGGGWKN DDGSMSCGYC SFRGKRSTME DFYDVKAFKM EGQTVCMFGI FDGHGGSRAA EYLKKHLFSN LMTHPQFLTD TKLALSETYK QTDVAFLESE
601: KDTYRDDGST ASAAVLVGNH LYVANVGDSR TIVSKAGKAI ALSDDHKPNR SDERKRIESA GGVIMWAGTW RVGGVLAMSR AFGNRMLKQF VIAEPEIQDL
701: EIDHEAEFLV LASDGLWDVV PNEDAVSLTQ SEEEPVTAAR KLTDTAFARG SADNITCIVV KFRHDKTESQ PNPEAEAEPE PPEDEIQTES SNPSDEMETE
801: SIPKAEAEPV PEAIPEPKQE TEPKTKGEKA GE

Best Arabidopsis Sequence Match ( AT5G53140.1 )
(BLAST)

001: MVCSSFIRSF IVQAGCRIGV LAQGRHQFIH IKKTLSVGFG FRTSVIGFRT TSGIGFRTSA KMMVDTSAGE KRISLVDMPP EKVDDGGYIG GGWKNDDGSL
101: SCGYCSFRGK RSTMEDFYDI KASTIEGQAV CMFGIFDGHG GSRAAEYLKE HLFNNLMKHP QFLTDTKLAL NETYKQTDVA FLESEKDTYR DDGSTASAAV
201: LVGNHLYVAN VGDSRTIVSK AGKAIALSDD HKPNRSDERK RIESAGGVIM WAGTWRVGGV LAMSRAFGNR MLKQFVVAEP EIQDLEIDHE AELLVLASDG
301: LWDVVPNEDA VALAQSEEEP EAAARKLTDT AFSRGSADNI TCIVVKFRHD KTESPKIETN AMAESEPELN PTTELEPESN PSTALETESI PKAELESEPD
401: AIPDPKPETE PETKGEKAGE

Arabidopsis Description

Probable protein phosphatase 2C 76 [Source:UniProtKB/Swiss-Prot;Acc:Q94AT1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.