Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86777 | Canola | cytosol | 98.42 | 98.42 |
| AT4G11410.1 | Thale cress | cytosol, mitochondrion | 90.85 | 90.85 |
| KRH59919 | Soybean | cytosol, plastid | 74.45 | 74.92 |
| KRH41194 | Soybean | cytosol, plastid | 73.5 | 73.97 |
| VIT_02s0025g03380.t01 | Wine grape | cytosol | 71.61 | 72.06 |
| PGSC0003DMT400032133 | Potato | cytosol | 69.72 | 70.16 |
| CDY10884 | Canola | plastid | 70.98 | 69.88 |
| Solyc08g081200.2.1 | Tomato | cytosol | 68.77 | 69.21 |
| GSMUA_AchrUn_... | Banana | cytosol | 67.82 | 68.69 |
| CDX76338 | Canola | cytosol, plastid | 67.51 | 66.46 |
| EER96376 | Sorghum | mitochondrion, plastid | 65.62 | 65.82 |
| Os09t0570300-01 | Rice | plasma membrane | 64.98 | 65.19 |
| TraesCS4D01G003200.1 | Wheat | golgi | 64.35 | 64.56 |
| TraesCS4B01G002900.1 | Wheat | golgi | 64.35 | 64.56 |
| TraesCS4D01G002700.2 | Wheat | mitochondrion, plastid | 64.04 | 64.44 |
| TraesCS4B01G003400.1 | Wheat | plastid | 64.04 | 64.44 |
| Solyc08g008060.1.1 | Tomato | cytosol | 64.04 | 64.44 |
| TraesCS4A01G311400.1 | Wheat | mitochondrion, plastid | 63.72 | 63.92 |
| CDY69917 | Canola | endoplasmic reticulum | 60.88 | 63.28 |
| GSMUA_Achr2P18620_001 | Banana | plastid | 62.78 | 62.97 |
| TraesCS4D01G003400.2 | Wheat | mitochondrion | 63.41 | 62.42 |
| CDY44096 | Canola | mitochondrion, plastid | 70.98 | 62.33 |
| PGSC0003DMT400014810 | Potato | mitochondrion | 47.63 | 61.63 |
| Zm00001d047150_P003 | Maize | plastid | 60.25 | 60.63 |
| OQU92195 | Sorghum | cytosol | 59.94 | 60.32 |
| EER91987 | Sorghum | plastid | 58.68 | 59.42 |
| OQU92191 | Sorghum | plastid | 57.41 | 58.15 |
| Zm00001d019754_P001 | Maize | mitochondrion, plastid | 64.04 | 57.51 |
| TraesCS1B01G221200.1 | Wheat | cytosol | 57.1 | 57.46 |
| TraesCS5B01G461100.1 | Wheat | mitochondrion, plastid | 20.5 | 56.52 |
| TraesCS1A01G207500.1 | Wheat | cytosol | 56.15 | 56.51 |
| Os10t0547900-01 | Rice | cytosol | 55.84 | 56.37 |
| Os04t0291100-01 | Rice | mitochondrion | 55.52 | 56.05 |
| Zm00001d029840_P003 | Maize | plastid | 58.99 | 55.99 |
| TraesCS1D01G210800.1 | Wheat | plastid | 56.15 | 55.97 |
| Os10t0548000-02 | Rice | cytosol, peroxisome, plastid | 56.15 | 55.8 |
| TraesCS4A01G492800.1 | Wheat | mitochondrion, plastid | 20.19 | 55.65 |
| CDY18436 | Canola | cytosol | 55.84 | 55.14 |
| CDY52816 | Canola | cytosol | 55.52 | 55.0 |
| CDX74954 | Canola | cytosol | 55.52 | 55.0 |
| TraesCS3B01G220800.1 | Wheat | mitochondrion, plastid | 19.87 | 54.78 |
| CDY52817 | Canola | cytosol | 55.2 | 54.69 |
| CDY68648 | Canola | cytosol | 35.96 | 54.55 |
| CDX81232 | Canola | cytosol | 54.57 | 53.89 |
| CDY10440 | Canola | plastid | 54.26 | 52.92 |
| CDX88292 | Canola | cytosol | 26.18 | 52.87 |
| Zm00001d025129_P001 | Maize | mitochondrion | 39.12 | 52.77 |
| CDY11217 | Canola | mitochondrion | 54.89 | 52.57 |
| CDY40365 | Canola | mitochondrion | 54.57 | 52.27 |
| CDY55418 | Canola | cytosol | 47.63 | 50.5 |
| CDY72089 | Canola | cytosol | 30.28 | 47.76 |
| CDY72311 | Canola | cytosol | 30.28 | 47.52 |
| CDY53896 | Canola | plastid | 29.02 | 46.0 |
| CDY10441 | Canola | cytosol, extracellular, mitochondrion, plastid | 18.61 | 43.07 |
| CDX76323 | Canola | cytosol | 44.48 | 42.47 |
| CDY10985 | Canola | cytosol | 44.48 | 42.47 |
| CDY50440 | Canola | mitochondrion | 44.16 | 41.3 |
| CDY53433 | Canola | plastid | 43.22 | 39.37 |
| CDX71585 | Canola | mitochondrion | 34.7 | 32.45 |
| CDY70072 | Canola | cytosol | 15.14 | 28.74 |
| CDX92838 | Canola | cytosol | 27.13 | 26.88 |
| CDX89228 | Canola | cytosol, nucleus, peroxisome | 31.55 | 26.81 |
| CDX89249 | Canola | plastid | 33.44 | 26.7 |
| CDY29311 | Canola | plastid | 33.44 | 26.7 |
| CDY19025 | Canola | cytosol | 31.23 | 26.54 |
| CDY51384 | Canola | plastid | 32.49 | 25.88 |
| CDY15470 | Canola | plastid | 32.49 | 25.88 |
| CDY18175 | Canola | plastid | 32.49 | 25.75 |
| CDX89877 | Canola | plastid | 32.49 | 25.75 |
| CDY14325 | Canola | plastid | 31.86 | 25.0 |
| CDY18309 | Canola | plastid | 27.13 | 24.64 |
| CDX98171 | Canola | plastid | 26.81 | 24.36 |
| CDY29859 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 27.76 | 24.04 |
| CDY37755 | Canola | mitochondrion, plastid | 43.85 | 22.31 |
| CDY64354 | Canola | cytosol | 15.77 | 22.03 |
| CDX96191 | Canola | mitochondrion | 28.08 | 20.23 |
| CDY27027 | Canola | golgi, mitochondrion, nucleus | 28.39 | 20.09 |
| CDY29840 | Canola | plastid | 32.81 | 16.43 |
| CDX92832 | Canola | plastid | 32.81 | 16.33 |
| CDY08387 | Canola | cytosol, nucleus, plastid | 43.53 | 15.49 |
| CDY47833 | Canola | cytosol, nucleus, plastid | 43.22 | 15.38 |
| CDY38726 | Canola | cytosol, golgi, plastid | 29.34 | 11.18 |
Protein Annotations
| EnsemblPlants:CDY13264 | EnsemblPlantsGene:GSBRNA2T00071211001 | Gene3D:3.40.50.720 | GO:A0A078FJX7 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR24320 | PANTHER:PTHR24320:SF146 | PFAM:PF00106 | PRINTS:PR00081 | ProteinID:CDY13264 | ProteinID:CDY13264.1 |
| SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EEE7D5 | UniProt:A0A078FJX7 | MapMan:23.1.3.5.1 | : |
Description
BnaC09g23920DBnaC09g23920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJX7]
Coordinates
chrLK032033:-:365774..367844
Molecular Weight (calculated)
34660.2 Da
IEP (calculated)
6.859
GRAVY (calculated)
-0.210
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MWPFWWKGAS GFSAHSTAEQ VTHGIDGTAL TAIITGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR EKILKDTPQA KIDVMKLDLS SMASVRSFAS
101: EFKSLDLPLN LLINNAGIMA CPYTLSSDNI ELQFATNHLG HFLLTNLLLD TMKKTANESN TEGRIVILSS EGHRYAYREG IRFDKINDEA SYNTLQAYGQ
201: SKLCNILHAT ELARQFKEQG VNITVNSLHP GSIMTNLLRY HSFINTLGNA VGKYVLKSSP QGAATTCYAA LHPQAKGVSG EYLMDNNISS PNSQGKDTDL
301: AKKLWEFSLS LTGEEEL
101: EFKSLDLPLN LLINNAGIMA CPYTLSSDNI ELQFATNHLG HFLLTNLLLD TMKKTANESN TEGRIVILSS EGHRYAYREG IRFDKINDEA SYNTLQAYGQ
201: SKLCNILHAT ELARQFKEQG VNITVNSLHP GSIMTNLLRY HSFINTLGNA VGKYVLKSSP QGAATTCYAA LHPQAKGVSG EYLMDNNISS PNSQGKDTDL
301: AKKLWEFSLS LTGEEEL
001: MWPFWWKGAS GFSARSTAEE VTHGIDGTGL TAIVTGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR DKILKEIPQA KIDVMKLDLS SMASVRSFAS
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LDY7]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.