Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72089 | Canola | cytosol | 72.5 | 72.14 |
| CDY72311 | Canola | cytosol | 72.5 | 71.78 |
| CDY53433 | Canola | plastid | 97.0 | 55.75 |
| AT1G64590.1 | Thale cress | plastid | 91.5 | 54.79 |
| CDY10441 | Canola | cytosol, extracellular, mitochondrion, plastid | 34.0 | 49.63 |
| CDX88292 | Canola | cytosol | 38.5 | 49.04 |
| Solyc08g082870.2.1 | Tomato | cytosol | 75.0 | 44.51 |
| VIT_02s0025g02190.t01 | Wine grape | cytosol | 74.5 | 44.35 |
| CDX76323 | Canola | cytosol | 73.5 | 44.28 |
| CDY10985 | Canola | cytosol | 73.5 | 44.28 |
| PGSC0003DMT400031933 | Potato | cytosol | 74.5 | 44.21 |
| KRH41377 | Soybean | cytosol | 74.5 | 44.21 |
| GSMUA_Achr8P11870_001 | Banana | cytosol | 72.5 | 42.65 |
| CDY50440 | Canola | mitochondrion | 72.0 | 42.48 |
| TraesCS4B01G358400.1 | Wheat | mitochondrion | 70.0 | 42.04 |
| TraesCS4D01G351800.1 | Wheat | mitochondrion | 70.0 | 41.92 |
| TraesCS5A01G527400.1 | Wheat | mitochondrion | 69.5 | 41.74 |
| TraesCS4B01G358200.1 | Wheat | mitochondrion, plastid | 69.0 | 41.44 |
| TraesCS5A01G527300.1 | Wheat | mitochondrion | 70.0 | 41.18 |
| GSMUA_Achr11P... | Banana | cytosol | 70.5 | 40.87 |
| TraesCS4B01G358500.1 | Wheat | mitochondrion | 70.0 | 40.7 |
| Os03t0115700-01 | Rice | mitochondrion | 67.0 | 40.36 |
| HORVU4Hr1G086380.1 | Barley | mitochondrion, plastid | 69.5 | 40.17 |
| TraesCS4D01G351700.1 | Wheat | mitochondrion, plastid | 69.0 | 39.2 |
| Os06t0129100-01 | Rice | mitochondrion | 67.5 | 38.24 |
| TraesCS4B01G358300.1 | Wheat | plastid | 59.0 | 37.82 |
| OQU93381 | Sorghum | mitochondrion | 67.0 | 37.75 |
| Zm00001d045495_P001 | Maize | mitochondrion | 67.5 | 37.4 |
| Zm00001d027353_P001 | Maize | mitochondrion | 66.5 | 36.84 |
| EER87765 | Sorghum | mitochondrion | 66.0 | 36.67 |
| HORVU7Hr1G011180.12 | Barley | plastid | 65.0 | 36.21 |
| TraesCS7A01G061000.1 | Wheat | mitochondrion, plastid | 64.0 | 36.06 |
| TraesCS7D01G055800.1 | Wheat | mitochondrion, plastid | 64.0 | 35.36 |
| TraesCS4A01G428800.1 | Wheat | mitochondrion, plastid | 63.0 | 35.1 |
| CDY10440 | Canola | plastid | 51.0 | 31.38 |
| CDY70072 | Canola | cytosol | 26.0 | 31.14 |
| CDY18436 | Canola | cytosol | 49.5 | 30.84 |
| CDY40365 | Canola | mitochondrion | 51.0 | 30.82 |
| CDX81232 | Canola | cytosol | 48.0 | 29.91 |
| CDX76338 | Canola | cytosol, plastid | 48.0 | 29.81 |
| CDY52816 | Canola | cytosol | 47.5 | 29.69 |
| CDX74954 | Canola | cytosol | 47.5 | 29.69 |
| CDY52817 | Canola | cytosol | 47.0 | 29.38 |
| CDX86777 | Canola | cytosol | 46.0 | 29.02 |
| CDY13264 | Canola | cytosol | 46.0 | 29.02 |
| CDY11217 | Canola | mitochondrion | 48.0 | 29.0 |
| CDY10884 | Canola | plastid | 45.0 | 27.95 |
| CDY69917 | Canola | endoplasmic reticulum | 41.0 | 26.89 |
| CDY55418 | Canola | cytosol | 38.5 | 25.75 |
| CDY44096 | Canola | mitochondrion, plastid | 45.5 | 25.21 |
| CDY47833 | Canola | cytosol, nucleus, plastid | 95.5 | 21.44 |
| CDY08387 | Canola | cytosol, nucleus, plastid | 94.5 | 21.21 |
| CDX71585 | Canola | mitochondrion | 35.0 | 20.65 |
| CDX92838 | Canola | cytosol | 32.5 | 20.31 |
| CDX89228 | Canola | cytosol, nucleus, peroxisome | 36.0 | 19.3 |
| CDY19025 | Canola | cytosol | 36.0 | 19.3 |
| CDY29859 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 33.5 | 18.31 |
| CDY37755 | Canola | mitochondrion, plastid | 52.0 | 16.69 |
| CDX96191 | Canola | mitochondrion | 33.5 | 15.23 |
| CDX89249 | Canola | plastid | 30.0 | 15.11 |
| CDY29311 | Canola | plastid | 30.0 | 15.11 |
| CDY27027 | Canola | golgi, mitochondrion, nucleus | 33.5 | 14.96 |
| CDY68648 | Canola | cytosol | 15.0 | 14.35 |
| CDX89877 | Canola | plastid | 28.5 | 14.25 |
| CDY18175 | Canola | plastid | 28.5 | 14.25 |
| CDY14325 | Canola | plastid | 28.5 | 14.11 |
| CDY15470 | Canola | plastid | 27.0 | 13.57 |
| CDY51384 | Canola | plastid | 27.0 | 13.57 |
| CDX98171 | Canola | plastid | 20.0 | 11.46 |
| CDY18309 | Canola | plastid | 20.0 | 11.46 |
| CDY64354 | Canola | cytosol | 11.0 | 9.69 |
| CDY29840 | Canola | plastid | 29.5 | 9.32 |
| CDX92832 | Canola | plastid | 29.5 | 9.26 |
| CDY38726 | Canola | cytosol, golgi, plastid | 35.5 | 8.53 |
Protein Annotations
| EnsemblPlants:CDY53896 | EnsemblPlantsGene:GSBRNA2T00011657001 | Gene3D:3.40.50.720 | GO:A0A078IVB6 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR24320 | PANTHER:PTHR24320:SF114 | PFAM:PF00106 | PRINTS:PR00081 | ProteinID:CDY53896 | ProteinID:CDY53896.1 |
| SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EEF554 | UniProt:A0A078IVB6 | MapMan:35.1 | : |
Description
BnaA09g53030DBnaA09g53030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IVB6]
Coordinates
chrLK033248:+:4537..5355
Molecular Weight (calculated)
21810.4 Da
IEP (calculated)
9.439
GRAVY (calculated)
0.099
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MIETVKHLVG SGGPSGFGSR STAEHVTVNC DLRSLTAIIT GATSGIGAET ARVLAKRGAR LVIPARSLKT AEETKSRILS EFPYAEIIVM HLDLSSLASV
101: RRFVADFESL HLPLNILINN AGKYAHKHAI SEDGVEMTFA TNYLGHFLLT KLLLKNMIET AAQTGVQGRI VNVTSVIHSW FSGDMLQYLA DISRNNRYIN
101: RRFVADFESL HLPLNILINN AGKYAHKHAI SEDGVEMTFA TNYLGHFLLT KLLLKNMIET AAQTGVQGRI VNVTSVIHSW FSGDMLQYLA DISRNNRYIN
001: MIETVKHLIG SGGPSGFGSR STADHVTCNS DLRSLTAIIT GATSGIGAET ARVLAKRGAR LVLPARSVKT AEETKARILS EFPDAEIIVM HLDLSSLTSV
101: RRFVDDFESL NLPLNILINN AGKYAHKHAL SEDGVEMTFA TNYLGHFLLT KLLLKKMIET AAQTGVQGRI VNVTSVVHSW FSGDMLQYLA DISRNNRNYD
201: ATRAYALSKL ANVLHTVELS RLLHKMDANV TANCVHPGIV KTRLTRDREG VVTDLVFFLT SKLLKSVPQA AATTCYVATS PRLRNVCGKY FSDCNEARSS
301: KSGSCNLKAQ RLWTASDLLV SPPNSTTNLS HTSF
101: RRFVDDFESL NLPLNILINN AGKYAHKHAL SEDGVEMTFA TNYLGHFLLT KLLLKKMIET AAQTGVQGRI VNVTSVVHSW FSGDMLQYLA DISRNNRNYD
201: ATRAYALSKL ANVLHTVELS RLLHKMDANV TANCVHPGIV KTRLTRDREG VVTDLVFFLT SKLLKSVPQA AATTCYVATS PRLRNVCGKY FSDCNEARSS
301: KSGSCNLKAQ RLWTASDLLV SPPNSTTNLS HTSF
Arabidopsis Description
At1g64590/F1N19_15 [Source:UniProtKB/TrEMBL;Acc:Q9SGV6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.