CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017180.1-P	Field mustard	cytosol	99.69	99.69
CDX81232	Canola	cytosol	97.51	97.51
CDX88292	Canola	cytosol	45.79	93.63
CDY52816	Canola	cytosol	90.34	90.62
CDX74954	Canola	cytosol	90.03	90.31
CDY52817	Canola	cytosol	89.72	90.0
AT2G37540.1	Thale cress	cytosol	84.11	84.11
CDY68648	Canola	cytosol	46.42	71.29
CDY40365	Canola	mitochondrion	71.96	69.79
CDY10440	Canola	plastid	70.41	69.54
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	69.16	69.16
VIT_08s0040g03400.t01	Wine grape	plastid	69.47	68.83
CDY11217	Canola	mitochondrion	70.72	68.58
GSMUA_Achr8P20890_001	Banana	cytosol, mitochondrion, plastid	68.22	68.44
KRH32305	Soybean	plastid	68.54	68.11
Zm00001d039848_P002	Maize	cytosol, mitochondrion, plastid	67.6	67.81
Solyc10g086390.1.1	Tomato	mitochondrion	68.22	67.8
KRH19708	Soybean	nucleus	67.91	67.49
GSMUA_Achr7P15240_001	Banana	plastid	67.91	67.28
EES02479	Sorghum	cytosol, plastid	66.98	67.19
PGSC0003DMT400049292	Potato	mitochondrion	67.6	67.18
GSMUA_Achr11P...	Banana	cytosol	67.6	66.98
KRH67540	Soybean	nucleus	66.67	66.25
PGSC0003DMT400022813	Potato	mitochondrion	66.04	66.25
Solyc09g010510.2.1	Tomato	cytosol, mitochondrion, plastid	66.04	66.25
KRG95813	Soybean	nucleus	66.36	65.94
TraesCS3B01G091800.3	Wheat	cytosol	65.73	65.94
Os01t0151700-01	Rice	cytosol	65.73	65.73
CDY55418	Canola	cytosol	61.06	65.55
TraesCS5B01G279400.1	Wheat	plastid	64.49	64.29
TraesCS5D01G287000.1	Wheat	plastid	64.49	64.29
TraesCS5A01G280400.1	Wheat	plastid	63.86	63.66
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	25.86	60.58
HORVU3Hr1G013970.6	Barley	plastid	64.8	58.59
TraesCS3A01G077400.2	Wheat	cytosol, plastid	63.86	58.57
CDX76338	Canola	cytosol, plastid	57.32	57.14
CDY13264	Canola	cytosol	55.14	55.84
CDX86777	Canola	cytosol	54.83	55.52
CDY69917	Canola	endoplasmic reticulum	52.34	55.08
CDY10884	Canola	plastid	54.83	54.66
Zm00001d039397_P001	Maize	cytosol	40.5	53.5
HORVU5Hr1G075530.8	Barley	cytosol, nucleus, plastid	63.86	52.84
CDY72311	Canola	cytosol	32.71	51.98
CDY72089	Canola	cytosol	32.4	51.74
TraesCS3D01G077500.2	Wheat	cytosol, plastid	56.39	51.71
CDY53896	Canola	plastid	30.84	49.5
CDY10985	Canola	cytosol	51.09	49.4
CDX76323	Canola	cytosol	50.78	49.1
CDY44096	Canola	mitochondrion, plastid	55.14	49.03
CDY50440	Canola	mitochondrion	50.78	48.08
CDY53433	Canola	plastid	48.91	45.11
CDX71585	Canola	mitochondrion	39.88	37.76
CDY70072	Canola	cytosol	15.89	30.54
CDX92838	Canola	cytosol	28.97	29.06
CDX89228	Canola	cytosol, nucleus, peroxisome	31.78	27.35
CDY19025	Canola	cytosol	31.78	27.35
CDX89249	Canola	plastid	32.09	25.94
CDY29311	Canola	plastid	32.09	25.94
CDX89877	Canola	plastid	32.09	25.75
CDY18175	Canola	plastid	32.09	25.75
CDY29859	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	28.97	25.41
CDY51384	Canola	plastid	31.46	25.38
CDY15470	Canola	plastid	31.46	25.38
CDY37755	Canola	mitochondrion, plastid	48.6	25.04
CDY14325	Canola	plastid	31.46	25.0
CDY18309	Canola	plastid	26.79	24.64
CDX98171	Canola	plastid	26.48	24.36
CDX96191	Canola	mitochondrion	30.84	22.5
CDY64354	Canola	cytosol	15.89	22.47
CDY27027	Canola	golgi, mitochondrion, nucleus	30.53	21.88
CDY08387	Canola	cytosol, nucleus, plastid	49.84	17.96
CDY47833	Canola	cytosol, nucleus, plastid	49.22	17.73
CDY29840	Canola	plastid	31.78	16.11
CDX92832	Canola	plastid	31.46	15.86
CDY38726	Canola	cytosol, golgi, plastid	30.84	11.9

Protein Annotations

EnsemblPlants:CDY18436	EnsemblPlantsGene:GSBRNA2T00005432001	Gene3D:3.40.50.720	GO:A0A078FZG2	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF81	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ProteinID:CDY18436
ProteinID:CDY18436.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004EDAE0F	UniProt:A0A078FZG2	MapMan:35.1

Description

BnaA04g21510DBnaA04g21510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZG2]

Coordinates

chrLK032085:+:466904..469474

Molecular Weight (calculated)

34707.7 Da

IEP (calculated)

8.113

GRAVY (calculated)

0.011

Length

321 amino acids

Sequence
(BLAST)

001: MGIYGMVTGK AGKSGFGSAS TAEDVTQSID ANHLTAIITG GTSGIGLEAA RVLGLRGAHV IIAARNTKAA NESKEMILKM NPNALIDYLQ LDLSSIKSVR
101: SFVHQFLALN LPLNILINNA GVMFCPFQLT EDGIESQFAT NHIGHFLLTN LLLDKMKSSA RESGIEGRIV NLSSVAHTYT YTEGIKFDSI NDPDTYSEKK
201: AYGQSKLANL LHSNALSRKL QEEGVNITVN SVHPGLVTTN LFRHSGLGMS VFKAMSFFLW KNIPQGAATT CYVALHPSLK GVTGKYFADC NITTPSKFAT
301: DKSLADELWD FSIKLIDSLP N

Best Arabidopsis Sequence Match ( AT2G37540.1 )
(BLAST)

001: MGIYGVMTGK KGKSGFGSAS TAEDVTQAID ASHLTAIITG GTSGIGLEAA RVLAMRGAHV IIAARNPKAA NESKEMILQM NPNARVDYLQ IDVSSIKSVR
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:O80924]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.