CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, plasma membrane, golgi

Predictor Summary:

nucleus 1
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plastid, secretory
Any Predictor:	mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019028.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	99.45	89.66
CDX92838	Canola	cytosol	75.68	86.56
AT4G27760.1	Thale cress	cytosol	77.05	75.0
CDX89228	Canola	cytosol, nucleus, peroxisome	76.23	74.8
CDY19025	Canola	cytosol	75.96	74.53
VIT_17s0000g00520.t01	Wine grape	cytosol, mitochondrion, peroxisome	63.93	63.07
CDY70072	Canola	cytosol	27.87	61.08
Solyc03g098460.2.1	Tomato	cytosol	63.66	60.52
PGSC0003DMT400026316	Potato	cytosol	63.39	60.26
KRH09442	Soybean	cytosol	59.29	57.56
KRH38907	Soybean	endoplasmic reticulum	59.02	57.14
CDY64354	Canola	cytosol	33.33	53.74
CDX96191	Canola	mitochondrion	64.48	53.64
CDY27027	Canola	golgi, mitochondrion, nucleus	65.03	53.12
Os02t0116500-01	Rice	cytosol	57.1	52.25
TraesCS6A01G045200.1	Wheat	cytosol	57.92	52.22
TraesCS6D01G051500.1	Wheat	cytosol	58.2	52.08
GSMUA_Achr7P04190_001	Banana	cytosol	58.2	51.95
TraesCS6B01G060600.1	Wheat	cytosol	58.2	51.82
Zm00001d054039_P001	Maize	cytosol	57.38	50.48
EES04360	Sorghum	cytosol	56.83	49.17
Zm00001d014994_P001	Maize	cytosol	55.74	42.86
CDX88292	Canola	cytosol	15.03	35.03
CDY53896	Canola	plastid	18.31	33.5
CDY72089	Canola	cytosol	18.31	33.33
CDY72311	Canola	cytosol	18.31	33.17
CDY10884	Canola	plastid	26.23	29.81
CDY18436	Canola	cytosol	25.41	28.97
CDX81232	Canola	cytosol	25.41	28.97
CDX76338	Canola	cytosol, plastid	25.41	28.88
CDY69917	Canola	endoplasmic reticulum	24.04	28.85
CDY52817	Canola	cytosol	24.59	28.12
CDX74954	Canola	cytosol	24.32	27.81
CDY52816	Canola	cytosol	24.32	27.81
CDY13264	Canola	cytosol	24.04	27.76
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	10.38	27.74
CDX86777	Canola	cytosol	23.77	27.44
CDY10985	Canola	cytosol	24.59	27.11
CDY38726	Canola	cytosol, golgi, plastid	61.2	26.92
CDY44096	Canola	mitochondrion, plastid	26.5	26.87
CDX76323	Canola	cytosol	24.32	26.81
CDY50440	Canola	mitochondrion	24.59	26.55
CDY53433	Canola	plastid	24.59	25.86
CDY10440	Canola	plastid	22.95	25.85
CDY55418	Canola	cytosol	21.04	25.75
CDY40365	Canola	mitochondrion	23.22	25.68
CDY11217	Canola	mitochondrion	22.68	25.08
CDY68648	Canola	cytosol	12.3	21.53
CDY18175	Canola	plastid	22.68	20.75
CDX89249	Canola	plastid	22.4	20.65
CDY29311	Canola	plastid	22.13	20.4
CDY51384	Canola	plastid	22.13	20.35
CDY15470	Canola	plastid	22.13	20.35
CDY14325	Canola	plastid	22.4	20.3
CDX89877	Canola	plastid	22.13	20.25
CDX98171	Canola	plastid	17.21	18.05
CDY18309	Canola	plastid	17.21	18.05
CDX71585	Canola	mitochondrion	15.85	17.11
CDY29840	Canola	plastid	23.5	13.59
CDX92832	Canola	plastid	23.22	13.34
CDY37755	Canola	mitochondrion, plastid	22.68	13.32
CDY08387	Canola	cytosol, nucleus, plastid	25.41	10.44
CDY47833	Canola	cytosol, nucleus, plastid	25.14	10.33

Protein Annotations

EnsemblPlants:CDY29859	EnsemblPlantsGene:GSBRNA2T00044303001	Gene3D:3.40.50.720	GO:A0A078GXK4	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF73	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ProteinID:CDY29859
ProteinID:CDY29859.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004EEEDE8	UniProt:A0A078GXK4	MapMan:35.1

Description

BnaA03g48800DBnaA03g48800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXK4]

Coordinates

chrLK032245:+:133180..135513

Molecular Weight (calculated)

40515.4 Da

IEP (calculated)

8.997

GRAVY (calculated)

-0.024

Length

366 amino acids

Sequence
(BLAST)

001: MRGWSSVFGE ILFQRITASH LLNPLPLPPL NDVTCVVTGS TSDIGRETAR QLAEAGAHVV MAVRNTKAAQ ELIHQWQNEW SGKGLPLNIE AMELDLISLD
101: SVARFADAWN ARLGPLHVLI NNAGIFAMGE EQKSSEDGYE QHMQVNHLAP ALLSVLLLPS LIRGSPSRII NVNSVMHSVG FVDPDDMNVV SGRRKYSSVI
201: GYSSSKLAQI MFSSILFKKL PLETGVSVIC LSPGVVLTNV ARDLPRILQA LYAVIPYFIF SPQEGCRKAH NTETAHRVWE KTLELVGLPL DAVEKLMEGK
301: ISNADMDLSN NSRPKKTTKR STCSPYRSKV LLLNFLIYCT LGTESPRHIT CDLLRKRTRM GVRMNV

Best Arabidopsis Sequence Match ( AT4G27760.1 )
(BLAST)

001: MSDETTSSPS PAPAKKKQNL GWMEWMRGWS SVFGEILFQR ITASHLENPL PLPSVNDLTC VVTGSTSGIG RETARQLAEA GAHVVMAVRN TKAAQELILQ
101: WQNEWSGKGL PLNIEAMEID LLSLDSVARF AEAFNARLGP LHVLINNAGM FAMGEAQKFS EEGYEQHMQV NHLAPALLSV LLLPSLIRGS PSRIINVNSV
201: MHSVGFVDPD DMNVVSGRRK YSSLIGYSSS KLAQIMFSSI LFKKLPLETG VSVVCLSPGV VLTNVARDLS RILQALYAVI PYFIFSPQEG CRSSLFSATD
301: PQIPEYWETL KNDDWPVCPF ISQDCRPANP SEEAHNTETA QRVWKKTLEL VGLPLDAVEK LIEGENIQCR YGAQHE

Arabidopsis Description

FEYDehydrogenase/reductase SDR family member FEY [Source:UniProtKB/Swiss-Prot;Acc:F4JJR8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.