CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, nucleus

Predictor Summary:

nucleus 2
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, nucleus
Any Predictor:	golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022628.1-P	Field mustard	cytosol, mitochondrion	88.62	99.0
CDX96191	Canola	mitochondrion	87.72	89.32
AT5G53090.1	Thale cress	cytosol	71.43	85.33
CDX92838	Canola	cytosol	54.02	75.62
CDX89228	Canola	cytosol, nucleus, peroxisome	62.5	75.07
CDY19025	Canola	cytosol	62.5	75.07
VIT_17s0000g00520.t01	Wine grape	cytosol, mitochondrion, peroxisome	59.82	72.24
CDY64354	Canola	cytosol	34.38	67.84
CDY70072	Canola	cytosol	25.22	67.66
PGSC0003DMT400026316	Potato	cytosol	57.59	67.01
Solyc03g098460.2.1	Tomato	cytosol	57.37	66.75
KRH09442	Soybean	cytosol	55.8	66.31
KRH38907	Soybean	endoplasmic reticulum	55.8	66.14
CDY29859	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	53.12	65.03
GSMUA_Achr7P04190_001	Banana	cytosol	54.24	59.27
Os02t0116500-01	Rice	cytosol	52.23	58.5
TraesCS6A01G045200.1	Wheat	cytosol	51.12	56.4
Zm00001d054039_P001	Maize	cytosol	52.01	56.01
TraesCS6D01G051500.1	Wheat	cytosol	51.12	55.99
TraesCS6B01G060600.1	Wheat	cytosol	50.89	55.47
EES04360	Sorghum	cytosol	52.01	55.08
Zm00001d014994_P001	Maize	cytosol	50.0	47.06
CDX88292	Canola	cytosol	12.5	35.67
CDY53896	Canola	plastid	14.96	33.5
CDY72089	Canola	cytosol	14.96	33.33
CDY72311	Canola	cytosol	14.96	33.17
CDX76338	Canola	cytosol, plastid	23.44	32.61
CDY38726	Canola	cytosol, golgi, plastid	60.27	32.45
CDY69917	Canola	endoplasmic reticulum	21.88	32.13
CDY10884	Canola	plastid	22.54	31.37
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	9.38	30.66
CDY18436	Canola	cytosol	21.88	30.53
CDX81232	Canola	cytosol	21.88	30.53
CDY52816	Canola	cytosol	21.21	29.69
CDY52817	Canola	cytosol	21.21	29.69
CDX74954	Canola	cytosol	21.21	29.69
CDX76323	Canola	cytosol	21.21	28.61
CDY10985	Canola	cytosol	21.21	28.61
CDY13264	Canola	cytosol	20.09	28.39
CDY44096	Canola	mitochondrion, plastid	22.77	28.25
CDX86777	Canola	cytosol	19.87	28.08
CDY50440	Canola	mitochondrion	20.98	27.73
CDY10440	Canola	plastid	20.09	27.69
CDY40365	Canola	mitochondrion	20.09	27.19
CDY53433	Canola	plastid	20.98	27.01
CDY55418	Canola	cytosol	17.86	26.76
CDY11217	Canola	mitochondrion	19.64	26.59
CDY68648	Canola	cytosol	10.49	22.49
CDX89249	Canola	plastid	19.64	22.17
CDY29311	Canola	plastid	19.64	22.17
CDY14325	Canola	plastid	19.42	21.53
CDY18175	Canola	plastid	19.2	21.5
CDX89877	Canola	plastid	18.97	21.25
CDY51384	Canola	plastid	18.75	21.11
CDY15470	Canola	plastid	18.75	21.11
CDX71585	Canola	mitochondrion	14.96	19.76
CDY18309	Canola	plastid	15.18	19.48
CDX98171	Canola	plastid	15.18	19.48
CDY37755	Canola	mitochondrion, plastid	20.09	14.45
CDY29840	Canola	plastid	19.42	13.74
CDX92832	Canola	plastid	19.2	13.5
CDY47833	Canola	cytosol, nucleus, plastid	21.21	10.66
CDY08387	Canola	cytosol, nucleus, plastid	21.21	10.66

Protein Annotations

EnsemblPlants:CDY27027	EnsemblPlantsGene:GSBRNA2T00036839001	Gene3D:3.40.50.720	GO:A0A078GPD3	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF73	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ProteinID:CDY27027
ProteinID:CDY27027.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004EEA63E	UniProt:A0A078GPD3	MapMan:35.1

Description

BnaA02g10470DBnaA02g10470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPD3]

Coordinates

chrLK032199:-:59616..63452

Molecular Weight (calculated)

50354.2 Da

IEP (calculated)

7.952

GRAVY (calculated)

-0.019

Length

448 amino acids

Sequence
(BLAST)

001: MSSETRRMKT KIKKKEGLRW MEWIRGWACV FHEFLFQRFM SSHLPNPLPL PPLSHLTCIV TGSTSGIGRE TARQLAEAGA HVVMAVRNTK AAHDLIQQWQ
101: RDWSAKGLPL NIEAMELDLL SLDSVVNFSN AWNARLAPLH VLINNAGIFA MGEEQKFSKD GYEQHMQVNH LAPALLSLLL LPSLNRASPS RIINVNSVMH
201: YVGFVDPDDM NVVSGRRKFT SLVGYSGSKL AQVMFSNVLF KRLPLESRIS VVCLSPGIVL TNVARDLPRS VQVQYALIPY FIFSPQEGCR SSLFSATDAQ
301: IPEHCEKLKT GDKPICTFIS QDCKHTKPSE EAQNVETANR VWETTVELIG LPLDALERLI QGQELLMLFL TFLLVVEEKS NVNHSMYTYC CLAEAGAHVV
401: MAVRNMKAAN ELIQQWRTKW SASVGTMYDD FVLQSNGIWI AMLSAYCH

Best Arabidopsis Sequence Match ( AT5G53090.1 )
(BLAST)

001: MSSETSSLTK KMKKKKEGLG WIESIKGWSC VFHEFLFQRF MASHLQNPLP LPSLNHLTCI VTGSTSGIGR ETARQLAEAG ARVVMAVRNT KAAHELIQQW
101: QKEWSGKGIP LNLEAMELDL LSLDSVVGFC NLWNARLSPL HVLINNAGIF SMGEEQKFSK DGYEQHMQVN HLAPALLSLL LLPSLIRGSP SRIINVNSVM
201: HYVGFVDPDD MNVVSGKRKF TSLVGYSGSK LAQVMFSNVL LKRLPLETRI SVVCLSPGIV LTNVARDLPR YVQVQYALIP YFIFSPQEGS RSTLFSATDA
301: QIPEHCEKLK TEDKPVCTFI SQNCKHTKPS EEAHNVETAE RVWEKTIKLI GLPLDAVERL IEGEEVQCRY GTHQQ

Arabidopsis Description

At5g53090 [Source:UniProtKB/TrEMBL;Acc:Q66GR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.