CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 21417358

msms PMID: 21417358 doi

DR Demartini, R Jain, G Agrawal, JJ Thelen

Department of Biochemistry and Interdisciplinary Plant Group, Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003004.1-P	Field mustard	plastid	99.01	99.26
CDX98171	Canola	plastid	83.17	96.28
CDY18309	Canola	plastid	82.92	95.99
AT5G54190.1	Thale cress	plastid	92.57	92.35
CDX89249	Canola	plastid	86.14	87.66
CDY29311	Canola	plastid	85.64	87.15
Solyc12g013710.1.1	Tomato	extracellular, nucleus, plastid	82.18	83.63
PGSC0003DMT400039734	Potato	plastid	81.44	82.87
KRH27209	Soybean	nucleus, plastid	81.44	82.46
VIT_19s0014g03160.t01	Wine grape	plastid	80.69	82.32
Solyc10g006900.2.1	Tomato	plastid	79.95	81.77
PGSC0003DMT400064369	Potato	plastid	80.45	81.66
TraesCS2D01G563700.1	Wheat	cytosol	47.77	80.08
KRH55334	Soybean	plastid	77.97	78.95
VIT_12s0059g00270.t01	Wine grape	plastid	77.23	78.2
PGSC0003DMT400047264	Potato	plastid	76.24	77.39
Solyc07g054210.2.1	Tomato	plastid	76.24	77.19
EER94008	Sorghum	plastid	75.0	76.9
Zm00001d013937_P001	Maize	plastid	75.25	76.77
CDY51384	Canola	plastid	75.5	76.63
CDY15470	Canola	plastid	75.5	76.63
KRH26074	Soybean	plastid	64.85	76.61
CDX89877	Canola	plastid	75.74	76.5
CDY18175	Canola	plastid	75.74	76.5
GSMUA_Achr3P14270_001	Banana	plastid	73.27	76.49
GSMUA_Achr11P...	Banana	plastid	74.75	76.26
Zm00001d032576_P001	Maize	plastid	74.75	76.26
TraesCS1B01G186300.1	Wheat	plastid	74.26	75.95
HORVU1Hr1G044680.1	Barley	plastid	74.01	75.7
Os04t0678700-01	Rice	plastid	71.29	74.42
Os10t0496900-02	Rice	plastid	73.76	74.13
TraesCS2A01G590600.1	Wheat	plastid	70.79	73.71
TraesCS2B01G593000.1	Wheat	plastid	70.54	73.45
TraesCS2D01G563600.1	Wheat	golgi, plastid	70.54	73.45
EES11656	Sorghum	plastid	69.31	72.73
GSMUA_Achr7P04280_001	Banana	plastid	71.04	72.11
TraesCS1A01G171000.1	Wheat	golgi, plastid	74.01	71.7
TraesCS1D01G168700.2	Wheat	plastid	73.76	71.46
Zm00001d001820_P001	Maize	plastid	68.32	71.32
HORVU2Hr1G006120.3	Barley	plastid	16.83	55.74
HORVU4Hr1G073090.1	Barley	plastid	19.31	55.71
HORVU2Hr1G119050.2	Barley	mitochondrion	51.24	55.2
CDX92832	Canola	plastid	85.15	54.0
CDY29840	Canola	plastid	83.91	53.55
HORVU5Hr1G104070.1	Barley	plastid	16.83	53.12
HORVU2Hr1G020490.1	Barley	plastid	21.04	52.47
CDX88292	Canola	cytosol	12.62	32.48
CDY10884	Canola	plastid	25.74	32.3
CDX76338	Canola	cytosol, plastid	25.5	31.99
CDX86777	Canola	cytosol	25.0	31.86
CDY13264	Canola	cytosol	25.0	31.86
CDY69917	Canola	endoplasmic reticulum	24.01	31.8
CDX74954	Canola	cytosol	25.0	31.56
CDY18436	Canola	cytosol	25.0	31.46
CDX81232	Canola	cytosol	25.0	31.46
CDY52817	Canola	cytosol	24.75	31.25
CDY52816	Canola	cytosol	24.75	31.25
CDY10440	Canola	plastid	24.01	29.85
CDY40365	Canola	mitochondrion	23.76	29.0
CDY11217	Canola	mitochondrion	23.51	28.7
CDY44096	Canola	mitochondrion, plastid	25.5	28.53
CDY53896	Canola	plastid	14.11	28.5
CDY72089	Canola	cytosol	14.11	28.36
CDY72311	Canola	cytosol	14.11	28.22
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	9.41	27.74
CDY10985	Canola	cytosol	22.77	27.71
CDX76323	Canola	cytosol	22.77	27.71
CDY55418	Canola	cytosol	20.3	27.42
CDX92838	Canola	cytosol	21.53	27.19
CDY50440	Canola	mitochondrion	22.52	26.84
CDY68648	Canola	cytosol	13.86	26.79
CDY53433	Canola	plastid	23.02	26.72
CDX89228	Canola	cytosol, nucleus, peroxisome	22.28	24.13
CDY70072	Canola	cytosol	9.9	23.95
CDY19025	Canola	cytosol	22.03	23.86
CDY29859	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	20.3	22.4
CDY64354	Canola	cytosol	12.38	22.03
CDX71585	Canola	mitochondrion	18.32	21.83
HORVU2Hr1G119090.2	Barley	plastid	22.77	21.75
CDY27027	Canola	golgi, mitochondrion, nucleus	21.53	19.42
CDX96191	Canola	mitochondrion	20.79	19.09
CDY37755	Canola	mitochondrion, plastid	22.28	14.45
CDY38726	Canola	cytosol, golgi, plastid	21.78	10.58
CDY47833	Canola	cytosol, nucleus, plastid	23.27	10.55
CDY08387	Canola	cytosol, nucleus, plastid	23.02	10.44

Protein Annotations

KEGG:00860+1.3.1.33	Gene3D:3.40.50.720	MapMan:7.12.6.5.1	GO:A0A078FIQ3	UniProt:A0A078FIQ3	EnsemblPlants:CDY14325
ProteinID:CDY14325	ProteinID:CDY14325.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995	GO:GO:0016491	GO:GO:0016630
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00078936001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00081	PANTHER:PTHR44419
PANTHER:PTHR44419:SF2	InterPro:Prochl_reduct	InterPro:SDR_fam	SUPFAM:SSF51735	TIGRFAMs:TIGR01289	UniPathway:UPA00668
UniParc:UPI0004EE1565	SEG:seg	:	:	:	:

Description

BnaA10g07300DBnaA10g07300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FIQ3]

Coordinates

chrLK032042:+:57691..59552

Molecular Weight (calculated)

43965.5 Da

IEP (calculated)

10.257

GRAVY (calculated)

-0.212

Length

404 amino acids

Sequence
(BLAST)

001: MALQAASLVS SAFSVRKDGK SNASSSFKES SLFGASLSDQ IKSDFVSFSL RCKRKQSLRT TGARIRAQTI VTSTTPSVTR STFDRKKTLR KGNVVVTGAS
101: SGLGLATAKA LAETGKWHVI MACRDFLKAE RAAKSAGMPK DSYTVMHLDL ASLDSVRQFV DNFRRAEMPL DVLVSNAAIY QPTANKPTFT AEGFELSVGT
201: NHLGHFLLSR LLIDDLKNSD YPSKRLIIVG SITGNTNTLA GNVPPKANLG DLRGLASGLN GLNSSAMIDG GDFNGAKAYK DSKVCNMLTM QEFHRRFHEE
301: TGITFASLYP GCIATTGLFR EHIPLFRSLF PLFQKYITKG YVSEAEAGKR LAQVVGDPNL TKSGVYWSWN KTSASFENQL SQEASDVEKA RRVWEVSEKL
401: VGLA

Best Arabidopsis Sequence Match ( AT5G54190.1 )
(BLAST)

001: MALQAASLVS SAFSVRKDGK LNASASSSFK ESSLFGVSLS EQSKADFVSS SLRCKREQSL RNNKAIIRAQ AIATSTPSVT KSSLDRKKTL RKGNVVVTGA
101: SSGLGLATAK ALAETGKWHV IMACRDFLKA ERAAQSAGMP KDSYTVMHLD LASLDSVRQF VDNFRRAEMP LDVLVCNAAV YQPTANQPTF TAEGFELSVG
201: INHLGHFLLS RLLIDDLKNS DYPSKRLIIV GSITGNTNTL AGNVPPKANL GDLRGLAGGL NGLNSSAMID GGDFVGAKAY KDSKVCNMLT MQEFHRRFHE
301: DTGITFASLY PGCIATTGLF REHIPLFRTL FPPFQKYITK GYVSESEAGK RLAQVVADPS LTKSGVYWSW NKTSASFENQ LSQEASDVEK ARRVWEVSEK
401: LVGLA

Arabidopsis Description

PORAPORA [Source:UniProtKB/TrEMBL;Acc:A0A178UR02]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.