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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS1A01G171000.1
TraesCS1A01G340600.1
TraesCS1B01G186300.1
TraesCS1D01G168700.2
TraesCS1D01G342600.1
TraesCS2A01G346700.1
TraesCS2A01G368500.1
TraesCS2A01G590600.1
TraesCS2B01G365000.1
TraesCS2B01G385700.2
TraesCS2B01G593000.1
TraesCS2D01G345400.1
TraesCS2D01G365300.2
TraesCS2D01G563600.1
TraesCS2D01G563700.1
TraesCS3A01G274800.1
TraesCS3A01G313000.1
TraesCS3B01G158900.1
TraesCS3B01G308400.1
TraesCS3D01G141300.1
TraesCS3D01G274500.1
TraesCS5A01G095100.1
TraesCS5B01G101300.1
TraesCS5D01G107800.1
TraesCS6A01G237600.1
TraesCS6B01G266100.1
TraesCS6D01G220300.1
TraesCS7A01G300700.1
TraesCS7D01G296400.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G03630.1 TraesCS1A01G171000.1 AT1G03630.1 21798944
AT1G03630.1 TraesCS1B01G186300.1 AT1G03630.1 21798944
AT1G03630.1 TraesCS1D01G168700.2 AT1G03630.1 21798944
AT1G03630.1 TraesCS2A01G590600.1 AT1G03630.1 21798944
AT1G03630.1 TraesCS2B01G593000.1 AT1G03630.1 21798944
AT1G03630.1 TraesCS2D01G563600.1 AT1G03630.1 21798944
AT1G03630.1 TraesCS2D01G563700.1 AT1G03630.1 21798944
AT1G03630.1 TraesCS2A01G346700.1 AT1G27300.1 21798944
AT1G03630.1 TraesCS2B01G365000.1 AT1G27300.1 21798944
AT1G03630.1 TraesCS2D01G345400.1 AT1G27300.1 21798944
AT1G03630.1 TraesCS1A01G340600.1 AT3G16310.1 21798944
AT1G03630.1 TraesCS1D01G342600.1 AT3G16310.1 21798944
AT1G03630.1 TraesCS3A01G274800.1 AT3G16310.1 21798944
AT1G03630.1 TraesCS3A01G313000.1 AT3G16310.1 21798944
AT1G03630.1 TraesCS3B01G158900.1 AT3G16310.1 21798944
AT1G03630.1 TraesCS3B01G308400.1 AT3G16310.1 21798944
AT1G03630.1 TraesCS3D01G141300.1 AT3G16310.1 21798944
AT1G03630.1 TraesCS3D01G274500.1 AT3G16310.1 21798944
AT1G03630.1 TraesCS2A01G368500.1 AT3G60600.1 21798944
AT1G03630.1 TraesCS2B01G385700.2 AT3G60600.1 21798944
AT1G03630.1 TraesCS2D01G365300.2 AT3G60600.1 21798944
AT1G03630.1 TraesCS6A01G237600.1 AT3G60600.1 21798944
AT1G03630.1 TraesCS6B01G266100.1 AT3G60600.1 21798944
AT1G03630.1 TraesCS6D01G220300.1 AT3G60600.1 21798944
AT1G03630.1 TraesCS7A01G300700.1 AT3G60600.1 21798944
AT1G03630.1 TraesCS7D01G296400.1 AT3G60600.1 21798944
AT1G03630.1 TraesCS1A01G171000.1 AT4G27440.1 21798944
AT1G03630.1 TraesCS1B01G186300.1 AT4G27440.1 21798944
AT1G03630.1 TraesCS1D01G168700.2 AT4G27440.1 21798944
AT1G03630.1 TraesCS2A01G590600.1 AT4G27440.1 21798944
AT1G03630.1 TraesCS2B01G593000.1 AT4G27440.1 21798944
AT1G03630.1 TraesCS2D01G563600.1 AT4G27440.1 21798944
AT1G03630.1 TraesCS2D01G563700.1 AT4G27440.1 21798944
AT1G03630.1 TraesCS5A01G095100.1 AT5G11980.1 21798944
AT1G03630.1 TraesCS5B01G101300.1 AT5G11980.1 21798944
AT1G03630.1 TraesCS5D01G107800.1 AT5G11980.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU1Hr1G044680.1 Barley plastid 98.73 98.73
TraesCS1D01G168700.2 Wheat plastid 98.99 93.77
TraesCS1A01G171000.1 Wheat golgi, plastid 98.73 93.53
EER94008 Sorghum plastid 89.11 89.34
Zm00001d032576_P001 Maize plastid 88.35 88.13
Zm00001d013937_P001 Maize plastid 88.35 88.13
Os10t0496900-02 Rice plastid 88.61 87.06
GSMUA_Achr11P... Banana plastid 77.97 77.78
CDX89249 Canola plastid 77.47 77.08
CDY29311 Canola plastid 77.47 77.08
Bra026349.1-P Field mustard plastid 75.44 76.8
VIT_19s0014g03160.t01 Wine grape plastid 76.96 76.77
Solyc10g006900.2.1 Tomato plastid 76.71 76.71
PGSC0003DMT400064369 Potato plastid 76.96 76.38
PGSC0003DMT400039734 Potato plastid 76.71 76.32
Solyc12g013710.1.1 Tomato extracellular, nucleus, plastid 76.71 76.32
AT4G27440.1 Thale cress plastid 77.22 76.06
VIT_12s0059g00270.t01 Wine grape plastid 76.71 75.94
KRH27209 Soybean nucleus, plastid 76.2 75.44
Bra019049.1-P Field mustard plastid 75.95 75.38
AT5G54190.1 Thale cress plastid 76.96 75.06
Bra003004.1-P Field mustard plastid 75.95 74.44
AT1G03630.1 Thale cress plastid 75.44 74.31
CDY14325 Canola plastid 75.95 74.26
Bra033415.1-P Field mustard plastid 74.68 73.75
TraesCS2B01G593000.1 Wheat plastid 72.41 73.71
KRH55334 Soybean plastid 74.43 73.68
CDY51384 Canola plastid 74.18 73.62
CDX89877 Canola plastid 74.43 73.5
CDY15470 Canola plastid 73.92 73.37
Bra030540.1-P Field mustard plastid 73.92 73.37
CDY18175 Canola plastid 74.18 73.25
PGSC0003DMT400047264 Potato plastid 73.16 72.61
CDX98171 Canola plastid 63.8 72.21
Solyc07g054210.2.1 Tomato plastid 72.91 72.18
CDY18309 Canola plastid 63.54 71.92
KRH26074 Soybean plastid 61.01 70.47
CDY29840 Canola plastid 75.95 47.39
CDX92832 Canola plastid 75.95 47.1
TraesCS4B01G003400.1 Wheat plastid 26.58 33.33
TraesCS4B01G002900.1 Wheat golgi 26.58 33.23
TraesCS3B01G220800.1 Wheat mitochondrion, plastid 9.62 33.04
TraesCS5B01G461100.1 Wheat mitochondrion, plastid 9.11 31.3
TraesCS5B01G279400.1 Wheat plastid 24.81 30.43
TraesCS3B01G091800.3 Wheat cytosol 23.54 29.06
TraesCS1B01G221200.1 Wheat cytosol 23.04 28.89
TraesCS4B01G097100.1 Wheat mitochondrion 22.28 27.24
TraesCS4B01G358400.1 Wheat mitochondrion 22.28 26.43
TraesCS4B01G358200.1 Wheat mitochondrion, plastid 22.03 26.13
TraesCS4B01G358300.1 Wheat plastid 20.25 25.64
TraesCS4B01G358500.1 Wheat mitochondrion 22.28 25.58
TraesCS6B01G060600.1 Wheat cytosol 22.28 21.41
Protein Annotations
EnsemblPlants:TraesCS1B01G186300.1EnsemblPlantsGene:TraesCS1B01G186300Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016630GO:GO:0055114InterPro:NAD(P)-bd_dom_sfInterPro:Prochl_reductInterPro:SDR_fam
KEGG:00860+1.3.1.33PANTHER:PTHR44419PANTHER:PTHR44419:SF2PFAM:PF00106PRINTS:PR00081SEG:seg
SUPFAM:SSF51735TIGR:cd09810TIGRFAMs:TIGR01289MapMan:7.12.6.5.1::
Description
No Description!
Coordinates
chr1B:-:333322177..333324024
Molecular Weight (calculated)
42218.5 Da
IEP (calculated)
9.648
GRAVY (calculated)
-0.090
Length
395 amino acids
Sequence
(BLAST)
001: MALQAATSFL PSALSARKEG AAKDSAFFGA RLADGLKFDT TSLGLRTKRV NTSSVAIRAQ AAAVSAPTAT PASLSGKKTV RTGNAIITGA SSGLGLATAK
101: ALAESGKWHV IMACRDYLKT ARAARAAGMP KGSYTIVHLD LASLDSVRQF VKNVRQLDMP IDVVVCNAAV YQPTAKEPSF TADGFEMSVG VNHLGHFLLA
201: RELLEDLKAS DYPSKRLIIV GSITGNTNTL AGNVPPKANL GDLRGLAAGL NGVGSAAMID GAEFDGAKAY KDSKVCNMLT MQEFHRRYHE ETGVTFASLY
301: PGCIATTGLF REHIPLFRLL FPPFQKYITK GYVSEEEAGK RLAQVVSEPS LTKSGVYWSW NKNSASFENQ LSEEASDTEK ARKVWELSEK LVGLA
Best Arabidopsis Sequence Match ( AT5G54190.1 )
(BLAST)
001: MALQAASLVS SAFSVRKDGK LNASASSSFK ESSLFGVSLS EQSKADFVSS SLRCKREQSL RNNKAIIRAQ AIATSTPSVT KSSLDRKKTL RKGNVVVTGA
101: SSGLGLATAK ALAETGKWHV IMACRDFLKA ERAAQSAGMP KDSYTVMHLD LASLDSVRQF VDNFRRAEMP LDVLVCNAAV YQPTANQPTF TAEGFELSVG
201: INHLGHFLLS RLLIDDLKNS DYPSKRLIIV GSITGNTNTL AGNVPPKANL GDLRGLAGGL NGLNSSAMID GGDFVGAKAY KDSKVCNMLT MQEFHRRFHE
301: DTGITFASLY PGCIATTGLF REHIPLFRTL FPPFQKYITK GYVSESEAGK RLAQVVADPS LTKSGVYWSW NKTSASFENQ LSQEASDVEK ARRVWEVSEK
401: LVGLA
Arabidopsis Description
PORAPORA [Source:UniProtKB/TrEMBL;Acc:A0A178UR02]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.