Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G077400.2 | Wheat | cytosol, plastid | 93.75 | 85.71 |
| HORVU3Hr1G013970.6 | Barley | plastid | 94.69 | 85.35 |
| EES02479 | Sorghum | cytosol, plastid | 85.0 | 85.0 |
| Zm00001d039848_P002 | Maize | cytosol, mitochondrion, plastid | 84.69 | 84.69 |
| Os01t0151700-01 | Rice | cytosol | 84.69 | 84.42 |
| TraesCS5B01G279400.1 | Wheat | plastid | 83.75 | 83.23 |
| GSMUA_Achr8P20890_001 | Banana | cytosol, mitochondrion, plastid | 74.06 | 74.06 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 74.06 | 73.83 |
| TraesCS3D01G077500.2 | Wheat | cytosol, plastid | 79.69 | 72.86 |
| PGSC0003DMT400049292 | Potato | mitochondrion | 71.88 | 71.21 |
| VIT_08s0040g03400.t01 | Wine grape | plastid | 71.56 | 70.68 |
| GSMUA_Achr7P15240_001 | Banana | plastid | 71.56 | 70.68 |
| Solyc10g086390.1.1 | Tomato | mitochondrion | 71.25 | 70.59 |
| GSMUA_Achr11P... | Banana | cytosol | 70.62 | 69.75 |
| Solyc09g010510.2.1 | Tomato | cytosol, mitochondrion, plastid | 68.75 | 68.75 |
| PGSC0003DMT400022813 | Potato | mitochondrion | 68.44 | 68.44 |
| CDX88292 | Canola | cytosol | 32.81 | 66.88 |
| KRH32305 | Soybean | plastid | 66.88 | 66.25 |
| CDX81232 | Canola | cytosol | 66.25 | 66.04 |
| Bra017180.1-P | Field mustard | cytosol | 66.25 | 66.04 |
| CDY18436 | Canola | cytosol | 65.94 | 65.73 |
| KRG95813 | Soybean | nucleus | 66.25 | 65.63 |
| KRH19708 | Soybean | nucleus | 66.25 | 65.63 |
| Zm00001d039397_P001 | Maize | cytosol | 49.69 | 65.43 |
| KRH67540 | Soybean | nucleus | 65.94 | 65.33 |
| CDY68648 | Canola | cytosol | 41.88 | 64.11 |
| Bra005188.1-P | Field mustard | cytosol | 63.44 | 64.04 |
| CDY52816 | Canola | cytosol | 63.75 | 63.75 |
| CDX74954 | Canola | cytosol | 63.75 | 63.75 |
| CDY52817 | Canola | cytosol | 63.44 | 63.44 |
| AT2G37540.1 | Thale cress | cytosol | 63.12 | 62.93 |
| CDY10440 | Canola | plastid | 63.44 | 62.46 |
| CDY40365 | Canola | mitochondrion | 64.38 | 62.24 |
| Bra005729.1-P | Field mustard | mitochondrion | 64.06 | 61.93 |
| Bra009580.1-P | Field mustard | mitochondrion | 64.06 | 61.93 |
| CDY11217 | Canola | mitochondrion | 64.06 | 61.93 |
| AT5G02540.1 | Thale cress | mitochondrion | 63.44 | 61.33 |
| CDY55418 | Canola | cytosol | 55.0 | 58.86 |
| TraesCS4B01G002900.1 | Wheat | golgi | 54.38 | 55.06 |
| TraesCS4B01G003400.1 | Wheat | plastid | 54.06 | 54.92 |
| CDY10441 | Canola | cytosol, extracellular, mitochondrion, plastid | 23.44 | 54.74 |
| TraesCS4B01G097100.1 | Wheat | mitochondrion | 55.0 | 54.49 |
| TraesCS3B01G220800.1 | Wheat | mitochondrion, plastid | 19.06 | 53.04 |
| TraesCS5B01G461100.1 | Wheat | mitochondrion, plastid | 19.06 | 53.04 |
| TraesCS1B01G221200.1 | Wheat | cytosol | 50.94 | 51.75 |
| TraesCS4B01G358400.1 | Wheat | mitochondrion | 50.62 | 48.65 |
| TraesCS4B01G358200.1 | Wheat | mitochondrion, plastid | 49.38 | 47.45 |
| TraesCS4B01G358500.1 | Wheat | mitochondrion | 50.62 | 47.09 |
| TraesCS4B01G358300.1 | Wheat | plastid | 44.38 | 45.51 |
| TraesCS2B01G593000.1 | Wheat | plastid | 31.25 | 25.77 |
| TraesCS6B01G060600.1 | Wheat | cytosol | 30.94 | 24.09 |
| TraesCS1B01G186300.1 | Wheat | plastid | 29.06 | 23.54 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G091800.3 | EnsemblPlantsGene:TraesCS3B01G091800 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR24320 |
| PANTHER:PTHR24320:SF81 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | SEG:seg | SUPFAM:SSF51735 |
| TIGR:cd05327 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:60864353..60868262
Molecular Weight (calculated)
34879.5 Da
IEP (calculated)
9.159
GRAVY (calculated)
0.026
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MGILSLITGK PGASGFGSGS TAEQVTEDIC AAGLTVVVTG GSSGIGLETS RVFALRGAHV IIAARNTEAA SEAKKRIMKI HPVARIDVLK LDLSSLKSVR
101: AFADQFNAMN LPLNILINNA GVMFCPFQLS EDEVEMQFAT NHLGHFLLTN LLLDNMKTTA KSTGIEGRIV NLSSVAHLHT YPKGILFDQL NDKKIYNDKM
201: AYGQSKLANI LHAKELSRRL KEEGANITVN CVHPGLIMTN LMRHSFALMK AIQLVTYLFW KNVPQGAATT CYVGLNPQLK GVTGKYFADC NEEKTSAHAK
301: SDVLAKQLWE FSEELIRSVK
101: AFADQFNAMN LPLNILINNA GVMFCPFQLS EDEVEMQFAT NHLGHFLLTN LLLDNMKTTA KSTGIEGRIV NLSSVAHLHT YPKGILFDQL NDKKIYNDKM
201: AYGQSKLANI LHAKELSRRL KEEGANITVN CVHPGLIMTN LMRHSFALMK AIQLVTYLFW KNVPQGAATT CYVGLNPQLK GVTGKYFADC NEEKTSAHAK
301: SDVLAKQLWE FSEELIRSVK
001: MGIYGVMTGK KGKSGFGSAS TAEDVTQAID ASHLTAIITG GTSGIGLEAA RVLAMRGAHV IIAARNPKAA NESKEMILQM NPNARVDYLQ IDVSSIKSVR
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:O80924]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.