Factsheet for Solyc10g086390.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400049292	Potato	mitochondrion	95.67	95.67
Solyc09g010510.2.1	Tomato	cytosol, mitochondrion, plastid	79.57	80.31
GSMUA_Achr8P20890_001	Banana	cytosol, mitochondrion, plastid	73.99	74.69
Zm00001d039848_P002	Maize	cytosol, mitochondrion, plastid	73.06	73.75
EES02479	Sorghum	cytosol, plastid	73.06	73.75
KRH19708	Soybean	nucleus	73.06	73.06
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	72.14	72.59
VIT_08s0040g03400.t01	Wine grape	plastid	72.45	72.22
GSMUA_Achr11P...	Banana	cytosol	72.45	72.22
KRH32305	Soybean	plastid	71.83	71.83
Os01t0151700-01	Rice	cytosol	71.21	71.65
KRH67540	Soybean	nucleus	71.52	71.52
KRG95813	Soybean	nucleus	71.52	71.52
TraesCS3B01G091800.3	Wheat	cytosol	70.59	71.25
TraesCS5D01G287000.1	Wheat	plastid	70.9	71.12
TraesCS5B01G279400.1	Wheat	plastid	70.9	71.12
GSMUA_Achr7P15240_001	Banana	plastid	70.9	70.68
TraesCS5A01G280400.1	Wheat	plastid	70.28	70.5
CDY68648	Canola	cytosol	45.2	69.86
CDY10440	Canola	plastid	70.28	69.85
CDY40365	Canola	mitochondrion	71.52	69.79
Bra009580.1-P	Field mustard	mitochondrion	71.21	69.49
AT5G02540.1	Thale cress	mitochondrion	70.9	69.18
Bra017180.1-P	Field mustard	cytosol	68.11	68.54
CDY18436	Canola	cytosol	67.8	68.22
CDX81232	Canola	cytosol	67.18	67.6
CDY11217	Canola	mitochondrion	68.73	67.07
Bra005729.1-P	Field mustard	mitochondrion	68.73	67.07
Bra005188.1-P	Field mustard	cytosol	65.63	66.88
CDY52816	Canola	cytosol	65.94	66.56
AT2G37540.1	Thale cress	cytosol	65.94	66.36
CDX74954	Canola	cytosol	65.63	66.25
CDY52817	Canola	cytosol	65.33	65.94
CDX88292	Canola	cytosol	31.89	65.61
CDY55418	Canola	cytosol	60.68	65.55
TraesCS3A01G077400.2	Wheat	cytosol, plastid	68.73	63.43
HORVU3Hr1G013970.6	Barley	plastid	69.04	62.82
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	26.01	61.31
HORVU5Hr1G075530.8	Barley	cytosol, nucleus, plastid	69.66	57.99
Zm00001d039397_P001	Maize	cytosol	43.34	57.61
TraesCS3D01G077500.2	Wheat	cytosol, plastid	62.23	57.43
Solyc03g025410.2.1	Tomato	nucleus	55.42	57.19
Solyc03g025370.2.1	Tomato	cytosol, nucleus, plastid	54.18	55.91
Solyc08g081200.2.1	Tomato	cytosol	54.49	55.87
Solyc03g025400.2.1	Tomato	cytosol	53.56	54.75
Solyc03g025390.2.1	Tomato	cytosol	52.94	54.63
Solyc08g008060.1.1	Tomato	cytosol	52.01	53.33
Solyc08g082870.2.1	Tomato	cytosol	48.92	46.88
Solyc03g112540.2.1	Tomato	endoplasmic reticulum	48.92	43.89
Solyc06g071610.1.1	Tomato	plastid	46.44	40.98
Solyc03g098460.2.1	Tomato	cytosol	30.96	25.97
Solyc10g006900.2.1	Tomato	plastid	31.58	25.82
Solyc12g013710.1.1	Tomato	extracellular, nucleus, plastid	31.58	25.69
Solyc07g054210.2.1	Tomato	plastid	31.58	25.56
Solyc12g042640.1.1	Tomato	cytosol	27.86	24.79

Protein Annotations

EnsemblPlants:Solyc10g086390.1.1	EnsemblPlantsGene:Solyc10g086390.1	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	ncoils:Coil
PANTHER:PTHR24320	PANTHER:PTHR24320:SF81	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	UniParc:UPI00027694C9	UniProt:K4D471	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr10:-:65224639..65226573

Molecular Weight (calculated)

35345.9 Da

IEP (calculated)

8.949

GRAVY (calculated)

0.023

Length

323 amino acids

Sequence
(BLAST)

001: MLRLITGIRG ATGFGSASTA EEVTDGVDAT ALTVIITGGA SGIGLETARV LALRKAHVII AARNMEAANE AKQQILNENA SARIDILKLD LSSLKSVKAF
101: ADNFLALNLP LNILINNAGI MFCPFQLSED GIEMQFATNH LGHFYLTSLL LDKMKETAKS TGIEGRIVNL SSVAHLVCPR EGIRFQNIND KNSYQDKVAY
201: GQSKLANLLH ANELSRRLQE EGANITVNSV HPGLIMTNLM RHSAFLMRIL RVFTCLLWKN IPQGAATTCY VALHPSLKGV TGKYFSDCNE YKPSKLARDE
301: VLGRSLWDFS NNLINASQKI IDK

Best Arabidopsis Sequence Match ( AT5G02540.1 )
(BLAST)

001: MGLYSLITGR RGPSGFGSAS TAEEVTQGID ATNLTAIITG GTGGIGMETA RVLSKRGAHV VIGARNMGAA ENAKTEILRQ NANARVTLLQ LDLSSIKSIK
101: AFVREFHALH LPLNLLINNA GVMFCPYQLS EDGIELQFAT NHIGHFLLTN LLLDTMKNTA KTSGVEGRIL NVSSVAHIYT YQEGIQFDSI NDICSYSDKR
201: AYGQSKLANI LHANELSRQL QEEGVNITAN SVHPGLILTN LFQHTALLMR FLKFFSFYLW KNIPQGAATT CYVALHPSVK GVTGKYFADC NEVTPSKLAR
301: DETLAQKLWD FSVKLINSVS KKNYLGFDDT T

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KCF2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.