Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G280400.1 | Wheat | plastid | 98.76 | 98.76 |
| TraesCS5B01G279400.1 | Wheat | plastid | 98.14 | 98.14 |
| Zm00001d039848_P002 | Maize | cytosol, mitochondrion, plastid | 83.54 | 84.06 |
| EES02479 | Sorghum | cytosol, plastid | 83.54 | 84.06 |
| Os01t0151700-01 | Rice | cytosol | 81.06 | 81.31 |
| HORVU5Hr1G075530.8 | Barley | cytosol, nucleus, plastid | 95.96 | 79.64 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 73.6 | 73.83 |
| GSMUA_Achr8P20890_001 | Banana | cytosol, mitochondrion, plastid | 72.98 | 73.44 |
| PGSC0003DMT400049292 | Potato | mitochondrion | 71.74 | 71.52 |
| GSMUA_Achr7P15240_001 | Banana | plastid | 71.74 | 71.3 |
| Solyc10g086390.1.1 | Tomato | mitochondrion | 71.12 | 70.9 |
| VIT_08s0040g03400.t01 | Wine grape | plastid | 70.81 | 70.37 |
| GSMUA_Achr11P... | Banana | cytosol | 70.19 | 69.75 |
| PGSC0003DMT400022813 | Potato | mitochondrion | 68.63 | 69.06 |
| Solyc09g010510.2.1 | Tomato | cytosol, mitochondrion, plastid | 68.32 | 68.75 |
| KRG95813 | Soybean | nucleus | 68.32 | 68.11 |
| KRH67540 | Soybean | nucleus | 68.01 | 67.8 |
| KRH32305 | Soybean | plastid | 66.77 | 66.56 |
| KRH19708 | Soybean | nucleus | 66.15 | 65.94 |
| TraesCS3D01G077500.2 | Wheat | cytosol, plastid | 70.81 | 65.14 |
| CDX88292 | Canola | cytosol | 31.68 | 64.97 |
| Bra017180.1-P | Field mustard | cytosol | 64.6 | 64.8 |
| CDY18436 | Canola | cytosol | 64.29 | 64.49 |
| Zm00001d039397_P001 | Maize | cytosol | 48.45 | 64.2 |
| AT2G37540.1 | Thale cress | cytosol | 63.66 | 63.86 |
| CDX81232 | Canola | cytosol | 63.66 | 63.86 |
| Bra005188.1-P | Field mustard | cytosol | 62.73 | 63.72 |
| CDY52816 | Canola | cytosol | 62.73 | 63.12 |
| CDX74954 | Canola | cytosol | 62.73 | 63.12 |
| CDY52817 | Canola | cytosol | 62.42 | 62.81 |
| CDY10440 | Canola | plastid | 63.35 | 62.77 |
| CDY40365 | Canola | mitochondrion | 64.29 | 62.54 |
| AT5G02540.1 | Thale cress | mitochondrion | 63.98 | 62.24 |
| Bra009580.1-P | Field mustard | mitochondrion | 63.98 | 62.24 |
| CDY11217 | Canola | mitochondrion | 63.04 | 61.33 |
| Bra005729.1-P | Field mustard | mitochondrion | 63.04 | 61.33 |
| CDY68648 | Canola | cytosol | 39.44 | 60.77 |
| CDY55418 | Canola | cytosol | 54.35 | 58.53 |
| CDY10441 | Canola | cytosol, extracellular, mitochondrion, plastid | 24.53 | 57.66 |
| TraesCS4D01G093500.1 | Wheat | mitochondrion | 55.9 | 55.73 |
| TraesCS4D01G003200.1 | Wheat | golgi | 54.35 | 55.38 |
| TraesCS4D01G002700.2 | Wheat | mitochondrion, plastid | 53.73 | 54.92 |
| TraesCS1D01G210800.1 | Wheat | plastid | 52.8 | 53.46 |
| TraesCS4D01G003400.2 | Wheat | mitochondrion | 51.86 | 51.86 |
| TraesCS4D01G351800.1 | Wheat | mitochondrion | 50.0 | 48.2 |
| TraesCS4D01G351700.1 | Wheat | mitochondrion, plastid | 48.45 | 44.32 |
| TraesCS7D01G055800.1 | Wheat | mitochondrion, plastid | 46.89 | 41.71 |
| TraesCS2D01G563700.1 | Wheat | cytosol | 21.74 | 29.05 |
| TraesCS2D01G563600.1 | Wheat | golgi, plastid | 32.61 | 27.06 |
| TraesCS1D01G168700.2 | Wheat | plastid | 30.12 | 23.26 |
| TraesCS6D01G051500.1 | Wheat | cytosol | 28.26 | 22.25 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G287000.1 | EnsemblPlantsGene:TraesCS5D01G287000 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR24320 |
| PANTHER:PTHR24320:SF81 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | SEG:seg | SUPFAM:SSF51735 |
| TIGR:cd05327 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:386983211..386985089
Molecular Weight (calculated)
34650.6 Da
IEP (calculated)
7.640
GRAVY (calculated)
-0.065
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLLSLITGR PGASGFGSAS TAEQVTDGVD ASNLTVVITG GPSGIGLETS RVLALRGAHV IIAARNTEAA SEAKKSITEA NPAARVDVLK LDLSSLKSVR
101: AFADQFNSMN LPLNILINNA GVMFCPFQLS EDGVEMQFAT NHLGHFLLTN LLLDNMKATA ESTGIEGRIV NLSSIAHEHT YPKGIQFDTL NDKKTFDRRS
201: AYGQSKLANI LHAKELSRRL KEEGANITVN SLHPGVIMTN LMRHSYAVMK AIQVATCLIW KNVPQGAATT CYVGLSHQLK GVTGKYFADC NEEKTSKLAE
301: SDVLAKQLWE FSEELVKSAS QT
101: AFADQFNSMN LPLNILINNA GVMFCPFQLS EDGVEMQFAT NHLGHFLLTN LLLDNMKATA ESTGIEGRIV NLSSIAHEHT YPKGIQFDTL NDKKTFDRRS
201: AYGQSKLANI LHAKELSRRL KEEGANITVN SLHPGVIMTN LMRHSYAVMK AIQVATCLIW KNVPQGAATT CYVGLSHQLK GVTGKYFADC NEEKTSKLAE
301: SDVLAKQLWE FSEELVKSAS QT
001: MGIYGVMTGK KGKSGFGSAS TAEDVTQAID ASHLTAIITG GTSGIGLEAA RVLAMRGAHV IIAARNPKAA NESKEMILQM NPNARVDYLQ IDVSSIKSVR
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:O80924]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.