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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 3
  • mitochondrion 5
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
 golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G002700.2 Wheat mitochondrion, plastid 95.25 95.56
TraesCS4B01G002900.1 Wheat golgi 92.72 92.72
TraesCS5B01G461100.1 Wheat mitochondrion, plastid 31.33 86.09
TraesCS4A01G492800.1 Wheat mitochondrion, plastid 31.33 86.09
TraesCS3B01G220800.1 Wheat mitochondrion, plastid 31.01 85.22
TraesCS4D01G003400.2 Wheat mitochondrion 85.44 83.85
Os09t0570300-01 Rice plasma membrane 81.65 81.65
EER96376 Sorghum mitochondrion, plastid 81.01 81.01
GSMUA_AchrUn_... Banana cytosol 73.42 74.12
Zm00001d019754_P001 Maize mitochondrion, plastid 77.85 69.69
KRG91556 Soybean cytosol 68.04 68.69
PGSC0003DMT400040845 Potato cytosol 67.72 68.37
KRH59919 Soybean cytosol, plastid 67.72 67.94
VIT_02s0025g03380.t01 Wine grape cytosol 67.41 67.62
Solyc03g025410.2.1 Tomato nucleus 66.46 67.09
KRH41194 Soybean cytosol, plastid 66.46 66.67
VIT_16s0050g00760.t01 Wine grape plastid 65.82 66.45
KRH08894 Soybean plastid 45.25 65.9
PGSC0003DMT400040848 Potato plastid 64.87 65.5
Solyc08g081200.2.1 Tomato cytosol 64.87 65.08
PGSC0003DMT400032133 Potato cytosol 64.87 65.08
AT4G11410.1 Thale cress cytosol, mitochondrion 65.19 64.98
CDX86777 Canola cytosol 64.87 64.67
Bra035220.1-P Field mustard cytosol 64.87 64.67
PGSC0003DMT400040847 Potato cytosol 63.92 64.54
CDY13264 Canola cytosol 64.56 64.35
Solyc03g025370.2.1 Tomato cytosol, nucleus, plastid 63.61 64.22
KRH08897 Soybean cytosol, mitochondrion 63.61 64.01
Solyc03g025390.2.1 Tomato cytosol 62.97 63.58
PGSC0003DMT400085601 Potato plastid 31.65 62.11
Solyc03g025400.2.1 Tomato cytosol 61.71 61.71
CDY10884 Canola plastid 62.34 61.18
KRH38432 Soybean cytosol 61.71 61.13
KRH38419 Soybean plastid 61.39 60.81
CDX76338 Canola cytosol, plastid 61.71 60.56
Bra020819.1-P Field mustard cytosol, plastid 61.71 60.56
Bra013690.1-P Field mustard plastid 62.03 60.49
KRH35271 Soybean plastid 66.77 60.46
AT4G23430.2 Thale cress plastid 61.08 59.94
KRH08898 Soybean cytosol 59.81 59.81
PGSC0003DMT400014810 Potato mitochondrion 46.2 59.59
KRH35274 Soybean cytosol, mitochondrion, plastid 67.41 59.33
KRH38426 Soybean cytosol 61.08 59.2
Solyc08g008060.1.1 Tomato cytosol 58.86 59.05
KRH38433 Soybean cytosol 59.49 58.93
AT4G23420.3 Thale cress plastid 61.39 58.26
CDY69917 Canola endoplasmic reticulum 56.01 58.03
KRG91557 Soybean cytosol 37.97 57.69
KRH38431 Soybean plastid 58.86 57.59
TraesCS1D01G210800.1 Wheat plastid 56.96 56.6
CDY44096 Canola mitochondrion, plastid 62.34 54.57
TraesCS5D01G287000.1 Wheat plastid 55.38 54.35
TraesCS4D01G093500.1 Wheat mitochondrion 55.06 53.87
KRH08895 Soybean cytosol 62.34 51.57
TraesCS3D01G077500.2 Wheat cytosol, plastid 50.32 45.43
TraesCS4D01G351800.1 Wheat mitochondrion 47.47 44.91
TraesCS4D01G351700.1 Wheat mitochondrion, plastid 47.47 42.61
TraesCS7D01G055800.1 Wheat mitochondrion, plastid 47.15 41.16
VIT_16s0050g00750.t01 Wine grape plastid 67.72 34.24
TraesCS2D01G563700.1 Wheat cytosol 24.37 31.95
TraesCS2D01G563600.1 Wheat golgi, plastid 35.13 28.61
TraesCS1D01G168700.2 Wheat plastid 33.23 25.18
TraesCS6D01G051500.1 Wheat cytosol 32.28 24.94
Protein Annotations
EnsemblPlants:TraesCS4D01G003200.1EnsemblPlantsGene:TraesCS4D01G003200Gene3D:3.40.50.720InterPro:NAD(P)-bd_dom_sfInterPro:SDR_famPANTHER:PTHR24320
PANTHER:PTHR24320:SF146PFAM:PF00106PRINTS:PR00080PRINTS:PR00081SUPFAM:SSF51735TIGR:cd05327
MapMan:23.1.3.5.1:::::
Description
No Description!
Coordinates
chr4D:-:1382601..1386769
Molecular Weight (calculated)
33815.5 Da
IEP (calculated)
8.918
GRAVY (calculated)
0.022
Length
316 amino acids
Sequence
(BLAST)
001: MLPWIFSRKG ASGFSWASTA DQVTAGISAA GLTAIVTGAS SGIGAETARV LAARGAHVVM AVRNLAAAET VRQAVLAETP GASVEVMELD LSSLASVRKF
101: AADFAARGLP LNILINNAGV MATPFSLSKD GIEMQFATNH VGHFLLTHLL LETMKKTSHE SNVEGRIVNV SSEGHRFAYK EGIRFAKLND EEEYSTIAAY
201: GQSKLANILH ANELARRFKE EGVNITANSL HPGSIITNLL RHHSIIDVMS RTLGRLVLKN VQQGAATQCY VALHPGAKGV SGKYWSDSNL YEPSAKAKDA
301: ELGKKLWDYT LDLVAA
Best Arabidopsis Sequence Match ( AT4G11410.1 )
(BLAST)
001: MWPFWWKGAS GFSARSTAEE VTHGIDGTGL TAIVTGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR DKILKEIPQA KIDVMKLDLS SMASVRSFAS
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LDY7]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.