Factsheet for TraesCS1D01G210800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G221200.1	Wheat	cytosol	94.65	95.56
TraesCS1A01G207500.1	Wheat	cytosol	93.4	94.29
OQU92195	Sorghum	cytosol	78.93	79.68
EER91987	Sorghum	plastid	77.04	78.27
Zm00001d047150_P003	Maize	plastid	76.73	77.46
OQU92191	Sorghum	plastid	72.64	73.8
Zm00001d029840_P003	Maize	plastid	77.04	73.35
Os10t0547900-01	Rice	cytosol	72.01	72.93
Os10t0548000-02	Rice	cytosol, peroxisome, plastid	71.7	71.47
GSMUA_Achr2P18620_001	Banana	plastid	64.15	64.56
VIT_16s0050g00760.t01	Wine grape	plastid	61.95	62.94
VIT_02s0025g03380.t01	Wine grape	cytosol	61.01	61.59
KRG91556	Soybean	cytosol	59.43	60.38
PGSC0003DMT400040848	Potato	plastid	58.8	59.74
Solyc03g025370.2.1	Tomato	cytosol, nucleus, plastid	58.49	59.42
PGSC0003DMT400085601	Potato	plastid	29.87	59.01
KRH08894	Soybean	plastid	40.25	58.99
KRH41194	Soybean	cytosol, plastid	58.18	58.73
KRH59919	Soybean	cytosol, plastid	58.18	58.73
PGSC0003DMT400032133	Potato	cytosol	58.18	58.73
KRH08897	Soybean	cytosol, mitochondrion	57.86	58.6
PGSC0003DMT400040845	Potato	cytosol	57.55	58.47
Solyc08g081200.2.1	Tomato	cytosol	57.86	58.41
Solyc03g025410.2.1	Tomato	nucleus	57.23	58.15
Solyc03g025390.2.1	Tomato	cytosol	56.92	57.83
KRH38419	Soybean	plastid	57.55	57.37
PGSC0003DMT400040847	Potato	cytosol	56.29	57.19
TraesCS4D01G002700.2	Wheat	mitochondrion, plastid	56.6	57.14
KRH08898	Soybean	cytosol	56.6	56.96
TraesCS4D01G003200.1	Wheat	golgi	56.6	56.96
AT4G11410.1	Thale cress	cytosol, mitochondrion	56.6	56.78
CDX86777	Canola	cytosol	55.97	56.15
CDY13264	Canola	cytosol	55.97	56.15
Bra035220.1-P	Field mustard	cytosol	55.97	56.15
Solyc03g025400.2.1	Tomato	cytosol	55.66	56.01
PGSC0003DMT400014810	Potato	mitochondrion	43.08	55.92
AT4G23430.2	Thale cress	plastid	56.6	55.9
Solyc08g008060.1.1	Tomato	cytosol	55.35	55.87
KRH38432	Soybean	cytosol	55.97	55.8
CDY10884	Canola	plastid	56.29	55.59
Bra013690.1-P	Field mustard	plastid	56.6	55.56
KRH38426	Soybean	cytosol	56.6	55.21
KRH38433	Soybean	cytosol	55.35	55.17
CDX76338	Canola	cytosol, plastid	55.66	54.97
Bra020819.1-P	Field mustard	cytosol, plastid	55.66	54.97
TraesCS4D01G003400.2	Wheat	mitochondrion	55.03	54.35
KRH38431	Soybean	plastid	54.72	53.87
AT4G23420.3	Thale cress	plastid	55.66	53.15
TraesCS5D01G287000.1	Wheat	plastid	53.46	52.8
CDY69917	Canola	endoplasmic reticulum	50.31	52.46
KRG91557	Soybean	cytosol	34.28	52.4
KRH35271	Soybean	plastid	57.23	52.15
KRH35274	Soybean	cytosol, mitochondrion, plastid	58.49	51.81
CDY44096	Canola	mitochondrion, plastid	56.6	49.86
TraesCS4D01G093500.1	Wheat	mitochondrion	49.06	48.3
KRH08895	Soybean	cytosol	55.35	46.07
TraesCS4D01G351800.1	Wheat	mitochondrion	46.23	44.01
TraesCS3D01G077500.2	Wheat	cytosol, plastid	45.6	41.43
TraesCS4D01G351700.1	Wheat	mitochondrion, plastid	45.28	40.91
TraesCS7D01G055800.1	Wheat	mitochondrion, plastid	45.28	39.78
VIT_16s0050g00750.t01	Wine grape	plastid	63.84	32.48
TraesCS2D01G563700.1	Wheat	cytosol	19.81	26.14
TraesCS2D01G563600.1	Wheat	golgi, plastid	30.82	25.26
TraesCS1D01G168700.2	Wheat	plastid	28.62	21.82
TraesCS6D01G051500.1	Wheat	cytosol	27.36	21.27

Protein Annotations

EnsemblPlants:TraesCS1D01G210800.1	EnsemblPlantsGene:TraesCS1D01G210800	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR24320
PANTHER:PTHR24320:SF146	PFAM:PF00106	PRINTS:PR00081	SEG:seg	SUPFAM:SSF51735	TIGR:cd05327
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:296974450..296978343

Molecular Weight (calculated)

34198.4 Da

IEP (calculated)

9.102

GRAVY (calculated)

0.100

Length

318 amino acids

Sequence
(BLAST)

001: MWWFYRKGPS GFAGASTAEE VTAGIDGRGL VAVITGASRG IGRETARVLA LRGVRVVMAV RDVSAGARAK EAIQAEIRGG AEVDVLQLDL SSMASVGRFA
101: AEFASLNLPL NILINNAGVM ARDCNRSCDG LELHFATNHI GHFLLTNLLL ENMKSACRDS GVQGRIVNVS SSGHIMTYPQ GICFDKVHDP SGFNSLIAYG
201: QSKLANILHM NELSRILKDE GVNISANTVH PGVIVTSLFR NRTIVSALMN TVGRIISRSV EQGAATTCYV AMHPQVQGIT GKYFGNCNIA NPSSQAVDAE
301: LAKKLWNFSL QMCRFQIK

Best Arabidopsis Sequence Match ( AT4G11410.1 )
(BLAST)

001: MWPFWWKGAS GFSARSTAEE VTHGIDGTGL TAIVTGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR DKILKEIPQA KIDVMKLDLS SMASVRSFAS
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LDY7]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.