Factsheet for Os10t0547900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0548000-02	Rice	cytosol, peroxisome, plastid	81.85	80.56
OQU92195	Sorghum	cytosol	76.43	76.19
TraesCS1A01G207500.1	Wheat	cytosol	73.57	73.33
TraesCS1B01G221200.1	Wheat	cytosol	73.57	73.33
EER91987	Sorghum	plastid	72.29	72.52
Zm00001d047150_P003	Maize	plastid	72.61	72.38
TraesCS1D01G210800.1	Wheat	plastid	72.93	72.01
Zm00001d029840_P003	Maize	plastid	75.16	70.66
OQU92191	Sorghum	plastid	69.43	69.65
GSMUA_Achr2P18620_001	Banana	plastid	64.65	64.24
KRG91556	Soybean	cytosol	60.83	61.02
PGSC0003DMT400040847	Potato	cytosol	59.55	59.74
VIT_16s0050g00760.t01	Wine grape	plastid	59.55	59.74
PGSC0003DMT400040845	Potato	cytosol	59.24	59.42
Solyc03g025390.2.1	Tomato	cytosol	58.92	59.11
Solyc03g025410.2.1	Tomato	nucleus	58.6	58.79
VIT_02s0025g03380.t01	Wine grape	cytosol	58.6	58.41
PGSC0003DMT400040848	Potato	plastid	57.96	58.15
KRH38419	Soybean	plastid	58.6	57.68
Os09t0570300-01	Rice	plasma membrane	57.96	57.59
Solyc08g081200.2.1	Tomato	cytosol	57.64	57.46
Solyc03g025400.2.1	Tomato	cytosol	57.64	57.28
KRH59919	Soybean	cytosol, plastid	57.32	57.14
KRH41194	Soybean	cytosol, plastid	57.32	57.14
Solyc03g025370.2.1	Tomato	cytosol, nucleus, plastid	56.69	56.87
PGSC0003DMT400032133	Potato	cytosol	57.01	56.83
AT4G11410.1	Thale cress	cytosol, mitochondrion	57.32	56.78
CDY10884	Canola	plastid	57.64	56.21
KRH08897	Soybean	cytosol, mitochondrion	56.05	56.05
Bra013690.1-P	Field mustard	plastid	57.64	55.86
CDY13264	Canola	cytosol	56.37	55.84
CDX86777	Canola	cytosol	56.37	55.84
Bra035220.1-P	Field mustard	cytosol	56.37	55.84
Solyc08g008060.1.1	Tomato	cytosol	55.73	55.56
PGSC0003DMT400014810	Potato	mitochondrion	43.31	55.51
KRH08894	Soybean	plastid	38.22	55.3
PGSC0003DMT400085601	Potato	plastid	28.34	55.28
KRH08898	Soybean	cytosol	55.41	55.06
AT4G23430.2	Thale cress	plastid	56.37	54.97
CDX76338	Canola	cytosol, plastid	56.05	54.66
Bra020819.1-P	Field mustard	cytosol, plastid	56.05	54.66
KRH38433	Soybean	cytosol	55.41	54.55
Os01t0151700-01	Rice	cytosol	55.73	54.52
Os04t0291100-01	Rice	mitochondrion	54.46	54.46
KRH38432	Soybean	cytosol	55.1	54.23
KRH38426	Soybean	cytosol	55.41	53.37
KRH35271	Soybean	plastid	59.24	53.3
AT4G23420.3	Thale cress	plastid	55.73	52.55
KRG91557	Soybean	cytosol	34.71	52.4
KRH38431	Soybean	plastid	53.82	52.32
CDY69917	Canola	endoplasmic reticulum	50.32	51.8
KRH35274	Soybean	cytosol, mitochondrion, plastid	58.92	51.53
Os11t0181800-01	Rice	plasma membrane	53.82	51.37
Os11t0181700-02	Rice	cytosol, mitochondrion	53.82	50.9
CDY44096	Canola	mitochondrion, plastid	57.96	50.42
KRH08895	Soybean	cytosol	54.78	45.03
Os03t0115700-01	Rice	mitochondrion	47.13	44.58
Os06t0129100-01	Rice	mitochondrion	48.09	42.78
VIT_16s0050g00750.t01	Wine grape	plastid	62.42	31.36
Os04t0678700-01	Rice	plastid	32.8	26.61
Os02t0116500-01	Rice	cytosol	31.85	25.0
Os10t0496900-02	Rice	plastid	30.57	23.88

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EntrezGene:9269206	UniProt:A0A0P0XXH2	ProteinID:BAT11917.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf
EnsemblPlantsGene:Os10g0547900	EnsemblPlants:Os10t0547900-01	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	PANTHER:PTHR24320
PANTHER:PTHR24320:SF146	InterPro:SDR_fam	SUPFAM:SSF51735	UniParc:UPI0001C7A4FD	RefSeq:XP_015614682.1	RefSeq:XP_015614683.1
RefSeq:XP_015614684.1	RefSeq:XP_015614685.1	RefSeq:XP_015614686.1	RefSeq:XP_015614687.1	RefSeq:XP_015614688.1	RefSeq:XP_015614689.1
RefSeq:XP_015614690.1	RefSeq:XP_015614691.1	RefSeq:XP_015614692.1	RefSeq:XP_015614694.1	RefSeq:XP_015614695.1	RefSeq:XP_015614696.1
RefSeq:XP_015614697.1	RefSeq:XP_015614698.1	SEG:seg	:	:	:

Description

Similar to Short-chain dehydrogenase Tic32. (Os10t0547900-01)

Coordinates

chr10:-:21435154..21439354

Molecular Weight (calculated)

33795.7 Da

IEP (calculated)

9.751

GRAVY (calculated)

0.074

Length

314 amino acids

Sequence
(BLAST)

001: MCWFNRKGPS GFSGASTAEE VTAGVDARGL VAVITGASSG IGLETARVMA LRGVRVVMAV RNVAAGHRAS EAIRAEIPGA GIHVLEMDLS SMDSVRRFAT
101: EFEALNLPLN ILINNAGIMT RNCTRSIDGL ELQFATNHIG HFLLTNLLLE NMKRTSSKTG VEGRIVNVSS SAHFVTYPKG ICFDKVKEPS RFISLIAYGQ
201: SKLANILHST ELSRVLKEDG VNISANAVHP GVVTTNLFRH RTIINALVKS IGRFVHKTVE QGAATTCYVA LHSQFTGISG KYFSNCNLDT PSSQASNAEL
301: ANKLWEFSSK IVSS

Best Arabidopsis Sequence Match ( AT4G11410.1 )
(BLAST)

001: MWPFWWKGAS GFSARSTAEE VTHGIDGTGL TAIVTGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR DKILKEIPQA KIDVMKLDLS SMASVRSFAS
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LDY7]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.