Factsheet for Os11t0181700-02

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G093500.1	Wheat	mitochondrion	72.29	74.3
TraesCS4B01G097100.1	Wheat	mitochondrion	71.99	73.99
TraesCS4A01G218300.1	Wheat	mitochondrion	71.99	73.99
Os11t0181800-01	Rice	plasma membrane	72.89	73.56
EES08101	Sorghum	cytosol	78.61	71.12
GSMUA_Achr2P08080_001	Banana	mitochondrion	67.17	68.62
Zm00001d053067_P001	Maize	plastid	75.6	68.39
HORVU4Hr1G018230.1	Barley	plastid	73.19	62.63
Os09t0570300-01	Rice	plasma membrane	54.22	56.96
Os01t0151700-01	Rice	cytosol	52.41	54.21
Os10t0547900-01	Rice	cytosol	50.9	53.82
Os10t0548000-02	Rice	cytosol, peroxisome, plastid	50.0	52.04
Os04t0291100-01	Rice	mitochondrion	47.89	50.64
Os03t0115700-01	Rice	mitochondrion	45.48	45.48
Os06t0129100-01	Rice	mitochondrion	44.88	42.21
GSMUA_Achr3P22130_001	Banana	cytosol	60.54	28.55
Os04t0678700-01	Rice	plastid	28.92	24.81
Os02t0116500-01	Rice	cytosol	27.71	23.0
Os10t0496900-02	Rice	plastid	26.51	21.89

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EntrezGene:4349944	ProteinID:ABG22391.1	EMBL:AK062546	ProteinID:BAF27746.1
ProteinID:BAT12950.1	ProteinID:EEE51759.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005506	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016226
GO:GO:0051536	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os11g0181700	EnsemblPlants:Os11t0181700-02	PFAM:PF00106	PRINTS:PR00080
PRINTS:PR00081	PANTHER:PTHR31942	PANTHER:PTHR31942:SF36	UniProt:Q0IU69	InterPro:SDR_fam	SUPFAM:SSF51735
UniParc:UPI0000D899DE	RefSeq:XP_015615130.1	:	:	:	:

Description

Similar to retinol dehydrogenase 12. (Os11t0181700-01);Similar to Short-chain dehydrogenase Tic32. (Os11t0181700-02)

Coordinates

chr11:+:4094598..4097141

Molecular Weight (calculated)

36507.7 Da

IEP (calculated)

9.793

GRAVY (calculated)

-0.283

Length

332 amino acids

Sequence
(BLAST)

001: MGLWEWPWDR RRRGPSGLGP TSTAEEVTAG VDATHLTAIV TGATNGIGRE TARVLARRGA EVIIPARTME SGNAVKQSIA EEVPGSRLHV MEMDLASLDS
101: VRRFATAFDS SHTHLNILIN NAGIMGCPFK LSKDGIELQF ATNHVGHFLL TNLLLDKMKS TARKTGVQGR IVNVSSIAHK RSDGSCFDLN KLNDKSRYKP
201: LIAYAHSKLA NILHANELAK RFQEEGCNLT ANSLHPGVIL TNITRYVVTN SVMVSILSVG NLFLKNTQQG AATTCYLALH PELKDVSGKY FADCKEATPR
301: PAARDAELAK RLWDFSEQLV DTNRRGEFNR QK

Best Arabidopsis Sequence Match ( AT4G23420.1 )
(BLAST)

001: MWFFGSKGAS GFSSRSTAEE VTHGVDGTGL TAIVTGASSG IGVETARVLA LRGVHVVMAV RNTGAGAKVK EDIVKQVPGA KVDVMELELS SMESVRKFAS
101: EYKSAGLPLN LLINNAGIMA CPFMLSKDNI ELQFATNHLG HFLLTKLLLD TMKNTSRESK REGRIVNVSS EAHRYSYPEG VRFDKINDES SYSSIRAYGQ
201: SKLCNVLHAN ELAKQLKEDG VNITANSLHP GAIMTNLWGY FNSYLAGAVG AVAKYMVKSV PQGAATTCYV ALNPQVAGVT GEYFSDSNIA KPIELVKDTE
301: LAKKLWDFST KLTDSQ

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JNJ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.