Factsheet for TraesCS4A01G218300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G093500.1	Wheat	mitochondrion	98.76	98.76
TraesCS4B01G097100.1	Wheat	mitochondrion	97.83	97.83
HORVU4Hr1G018230.1	Barley	plastid	96.28	80.15
Os11t0181800-01	Rice	plasma membrane	77.71	76.29
Os11t0181700-02	Rice	cytosol, mitochondrion	73.99	71.99
GSMUA_Achr2P08080_001	Banana	mitochondrion	72.14	71.69
EES08101	Sorghum	cytosol	78.95	69.48
Zm00001d053067_P001	Maize	plastid	78.02	68.66
TraesCS5A01G280400.1	Wheat	plastid	55.11	55.28
TraesCS4A01G311400.1	Wheat	mitochondrion, plastid	53.56	54.75
TraesCS4A01G492800.1	Wheat	mitochondrion, plastid	18.27	51.3
TraesCS3A01G077400.2	Wheat	cytosol, plastid	54.8	50.57
TraesCS1A01G207500.1	Wheat	cytosol	48.92	50.16
TraesCS5A01G527400.1	Wheat	mitochondrion	47.37	45.95
TraesCS5A01G527300.1	Wheat	mitochondrion	47.37	45.0
TraesCS7A01G061000.1	Wheat	mitochondrion, plastid	46.13	41.97
TraesCS4A01G428800.1	Wheat	mitochondrion, plastid	45.2	40.67
GSMUA_Achr3P22130_001	Banana	cytosol	64.71	29.69
TraesCS6A01G045200.1	Wheat	cytosol	30.03	23.89
TraesCS2A01G590600.1	Wheat	plastid	28.48	23.71
TraesCS1A01G171000.1	Wheat	golgi, plastid	27.24	21.1

Protein Annotations

EnsemblPlants:TraesCS4A01G218300.1	EnsemblPlantsGene:TraesCS4A01G218300	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR31942
PANTHER:PTHR31942:SF36	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SEG:seg	SUPFAM:SSF51735
TIGR:cd05327	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:519675892..519678306

Molecular Weight (calculated)

34827.5 Da

IEP (calculated)

8.898

GRAVY (calculated)

-0.129

Length

323 amino acids

Sequence
(BLAST)

001: MGIWGWPWGR RGLSGFGSAS TAEDIAAGID ASHLTAIVTG ATNGIGKETA RVLALRGANV IIPARTLESG LKVKESLAEE VPSSKLHVME MDLSSLDSVR
101: TFAGSFNSSH KHLNVLINNA GIMACPFQLS KDGIELQFAT NHLGHFLLTN LLLDKMKSTA KETGVQGRIV NLASTAHRRS DGKGFDLNKL NNESKYNAFS
201: AYSHSKLANI LHANELSRRF QEEGCDLTAN SLHPGIIGTN IVRYITTNSV LASIFSLVKP FVKDIPQGAA TTCYVALHPD TRGVSGKYFA GCNEATPTSV
301: ARDAELAKRL WAFSEELVEN RSK

Best Arabidopsis Sequence Match ( AT2G37540.1 )
(BLAST)

001: MGIYGVMTGK KGKSGFGSAS TAEDVTQAID ASHLTAIITG GTSGIGLEAA RVLAMRGAHV IIAARNPKAA NESKEMILQM NPNARVDYLQ IDVSSIKSVR
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:O80924]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.