Factsheet for GSMUA_Achr2P08080_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 3
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G093500.1	Wheat	mitochondrion	72.0	72.45
TraesCS4B01G097100.1	Wheat	mitochondrion	71.69	72.14
TraesCS4A01G218300.1	Wheat	mitochondrion	71.69	72.14
Os11t0181800-01	Rice	plasma membrane	72.62	71.73
Os11t0181700-02	Rice	cytosol, mitochondrion	68.62	67.17
EES08101	Sorghum	cytosol	74.15	65.67
Zm00001d053067_P001	Maize	plastid	72.62	64.31
HORVU4Hr1G018230.1	Barley	plastid	72.31	60.57
GSMUA_Achr7P15240_001	Banana	plastid	60.0	60.19
GSMUA_Achr8P20890_001	Banana	cytosol, mitochondrion, plastid	58.15	59.06
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	58.15	58.88
GSMUA_AchrUn_...	Banana	cytosol	56.62	58.79
GSMUA_Achr11P...	Banana	cytosol	57.85	58.02
GSMUA_Achr2P18620_001	Banana	plastid	55.08	56.65
GSMUA_Achr11P...	Banana	cytosol	45.54	42.9
GSMUA_Achr8P11870_001	Banana	cytosol	44.0	42.06
GSMUA_Achr1P25440_001	Banana	cytosol	39.38	41.56
GSMUA_Achr3P22130_001	Banana	cytosol	68.62	31.68
GSMUA_Achr7P04190_001	Banana	cytosol	32.0	25.37
GSMUA_Achr11P...	Banana	plastid	30.77	25.25
GSMUA_Achr3P14270_001	Banana	plastid	29.54	24.81
GSMUA_Achr7P04280_001	Banana	plastid	28.92	23.62
GSMUA_AchrUn_...	Banana	cytosol	11.38	14.57

Protein Annotations

EnsemblPlants:GSMUA_Achr2P08080_001	EnsemblPlants:GSMUA_Achr2T08080_001	EnsemblPlantsGene:GSMUA_Achr2G08080_001	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR31942	PANTHER:PTHR31942:SF36	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	UniParc:UPI000296BCC6	UniProt:M0S649	MapMan:35.1	:	:

Description

Putative WW domain-containing oxidoreductase [Source:GMGC_GENE;Acc:GSMUA_Achr2G08080_001]

Coordinates

chr2:-:12220955..12223757

Molecular Weight (calculated)

35328.7 Da

IEP (calculated)

9.418

GRAVY (calculated)

-0.135

Length

325 amino acids

Sequence
(BLAST)

001: MGLLGWLWRA GPSGFGSSST AEQVTEGIDA SQLTAIVTGA TNGIGKETAR VLALRGAKVI IPSRTLDSGL KVKQSLLEQN PSAELHVMEM DLSSLDSVGS
101: FARSFNSSHK HLNILINNAG IMACPFQLSR DGIELQFATN HLGHFLLTNL LLDKMKATAK KMGVQGRIIN VSSNAHRTSD GSCFNLDKIN DQSKYKPFIA
201: YAHSKLANIL HANELSKHLQ EEGSNVTVNS LHPGVIFTNL VRHIEMNPTL MKSLAALAKP ILKSIPEGAA TTCYLALHPQ VKDVTGKYFA DCNEAMPSGK
301: ARDEIIGKTL WEFSEELVKR RSRPV

Best Arabidopsis Sequence Match ( AT4G23420.1 )
(BLAST)

001: MWFFGSKGAS GFSSRSTAEE VTHGVDGTGL TAIVTGASSG IGVETARVLA LRGVHVVMAV RNTGAGAKVK EDIVKQVPGA KVDVMELELS SMESVRKFAS
101: EYKSAGLPLN LLINNAGIMA CPFMLSKDNI ELQFATNHLG HFLLTKLLLD TMKNTSRESK REGRIVNVSS EAHRYSYPEG VRFDKINDES SYSSIRAYGQ
201: SKLCNVLHAN ELAKQLKEDG VNITANSLHP GAIMTNLWGY FNSYLAGAVG AVAKYMVKSV PQGAATTCYV ALNPQVAGVT GEYFSDSNIA KPIELVKDTE
301: LAKKLWDFST KLTDSQ

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JNJ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.