Factsheet for Os04t0291100-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025129_P001	Maize	mitochondrion	53.5	71.49
PGSC0003DMT400040848	Potato	plastid	61.47	61.66
Solyc03g025370.2.1	Tomato	cytosol, nucleus, plastid	61.15	61.34
PGSC0003DMT400040845	Potato	cytosol	59.87	60.06
VIT_16s0050g00760.t01	Wine grape	plastid	59.87	60.06
Solyc03g025410.2.1	Tomato	nucleus	58.92	59.11
Os09t0570300-01	Rice	plasma membrane	58.92	58.54
KRH38419	Soybean	plastid	59.24	58.31
Solyc03g025390.2.1	Tomato	cytosol	57.96	58.15
Solyc08g081200.2.1	Tomato	cytosol	58.28	58.1
KRH08897	Soybean	cytosol, mitochondrion	57.96	57.96
PGSC0003DMT400032133	Potato	cytosol	57.96	57.78
KRH59919	Soybean	cytosol, plastid	57.96	57.78
KRH41194	Soybean	cytosol, plastid	57.96	57.78
PGSC0003DMT400040847	Potato	cytosol	57.32	57.51
VIT_02s0025g03380.t01	Wine grape	cytosol	57.32	57.14
KRG91556	Soybean	cytosol	56.69	56.87
AT4G11410.1	Thale cress	cytosol, mitochondrion	57.01	56.47
KRH38426	Soybean	cytosol	58.6	56.44
Solyc03g025400.2.1	Tomato	cytosol	56.37	56.01
KRH38432	Soybean	cytosol	56.69	55.8
KRH08894	Soybean	plastid	38.53	55.76
Bra020819.1-P	Field mustard	cytosol, plastid	57.01	55.59
CDX76338	Canola	cytosol, plastid	57.01	55.59
CDY13264	Canola	cytosol	56.05	55.52
CDY10884	Canola	plastid	56.69	55.28
CDX86777	Canola	cytosol	55.73	55.2
Bra035220.1-P	Field mustard	cytosol	55.73	55.2
KRH38431	Soybean	plastid	56.37	54.8
PGSC0003DMT400085601	Potato	plastid	28.03	54.66
Os10t0547900-01	Rice	cytosol	54.46	54.46
Bra013690.1-P	Field mustard	plastid	56.05	54.32
KRH38433	Soybean	cytosol	55.1	54.23
KRH08898	Soybean	cytosol	54.46	54.11
Os10t0548000-02	Rice	cytosol, peroxisome, plastid	54.78	53.92
AT4G23430.2	Thale cress	plastid	55.1	53.73
Os01t0151700-01	Rice	cytosol	54.78	53.58
AT4G23420.3	Thale cress	plastid	56.69	53.45
Solyc08g008060.1.1	Tomato	cytosol	53.5	53.33
CDY69917	Canola	endoplasmic reticulum	51.59	53.11
PGSC0003DMT400014810	Potato	mitochondrion	41.4	53.06
KRG91557	Soybean	cytosol	33.76	50.96
KRH35271	Soybean	plastid	56.05	50.43
KRH35274	Soybean	cytosol, mitochondrion, plastid	56.69	49.58
CDY44096	Canola	mitochondrion, plastid	56.37	49.03
Os11t0181700-02	Rice	cytosol, mitochondrion	50.64	47.89
Os11t0181800-01	Rice	plasma membrane	50.0	47.72
KRH08895	Soybean	cytosol	57.01	46.86
Os03t0115700-01	Rice	mitochondrion	42.99	40.66
Os06t0129100-01	Rice	mitochondrion	44.9	39.94
VIT_16s0050g00750.t01	Wine grape	plastid	61.15	30.72
Os04t0678700-01	Rice	plastid	30.25	24.55
Os02t0116500-01	Rice	cytosol	29.3	23.0
Os10t0496900-02	Rice	plastid	28.66	22.39

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EntrezGene:4335398	ProteinID:BAF14305.1	ProteinID:BAS88420.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf
EnsemblPlantsGene:Os04g0291100	EnsemblPlants:Os04t0291100-01	PFAM:PF00106	PRINTS:PR00081	PANTHER:PTHR24320	PANTHER:PTHR24320:SF146
UniProt:Q0JED2	InterPro:SDR_fam	SUPFAM:SSF51735	UniParc:UPI000021CA30	RefSeq:XP_015636691.1	SEG:seg

Description

Similar to Short-chain dehydrogenase Tic32. (Os04t0291100-01);Hypothetical conserved gene. (Os04t0291100-02)

Coordinates

chr4:+:12669831..12673930

Molecular Weight (calculated)

34273.6 Da

IEP (calculated)

8.787

GRAVY (calculated)

0.119

Length

314 amino acids

Sequence
(BLAST)

001: MWGLLRRRSP SGFSPSSTAE EVTAAVDGSG LVAVVTGASS GIGAETCRVL AMRGLHVVMG VRNSSAGARV RDEIVRQLPA AKIEMLDLDL SLMSSVRRFA
101: ENFNALNLPL NILVNNAGIA FVPFKLSEEG IELHFSTNHL GHFLLTDLLL EKMKVTAIES GIEGRVVIVA SNSYKHPYRE GIRFDKINDE SGYNKIFAYG
201: QSKLANILHS NLLSSNLKEQ DAKVTVNSLH PGAVVTNIMR HWYFVNGMLS TLGKFFVKGV EQGAATVCYV ALHPQVAGVT GKYFVDCNVT ELKSHALDMG
301: LAKRLWDFSL NLIH

Best Arabidopsis Sequence Match ( AT4G11410.1 )
(BLAST)

001: MWPFWWKGAS GFSARSTAEE VTHGIDGTGL TAIVTGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR DKILKEIPQA KIDVMKLDLS SMASVRSFAS
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LDY7]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.