Factsheet for VIT_16s0050g00760.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
mitochondrion 2
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400040848	Potato	plastid	75.72	75.72
Solyc03g025370.2.1	Tomato	cytosol, nucleus, plastid	75.4	75.4
VIT_02s0025g03380.t01	Wine grape	cytosol	75.08	74.6
KRH38419	Soybean	plastid	75.4	73.98
GSMUA_Achr2P18620_001	Banana	plastid	71.57	70.89
GSMUA_AchrUn_...	Banana	cytosol	69.65	69.65
Os09t0570300-01	Rice	plasma membrane	68.69	68.04
EER96376	Sorghum	mitochondrion, plastid	67.73	67.09
TraesCS4B01G002900.1	Wheat	golgi	66.77	66.14
TraesCS4D01G003200.1	Wheat	golgi	66.45	65.82
TraesCS4A01G311400.1	Wheat	mitochondrion, plastid	66.13	65.51
TraesCS4D01G002700.2	Wheat	mitochondrion, plastid	65.81	65.4
TraesCS4B01G003400.1	Wheat	plastid	65.18	64.76
EER91987	Sorghum	plastid	64.22	64.22
OQU92195	Sorghum	cytosol	64.54	64.13
TraesCS1B01G221200.1	Wheat	cytosol	64.22	63.81
Zm00001d047150_P003	Maize	plastid	63.9	63.49
TraesCS1A01G207500.1	Wheat	cytosol	63.9	63.49
TraesCS5B01G461100.1	Wheat	mitochondrion, plastid	23.32	63.48
TraesCS4A01G492800.1	Wheat	mitochondrion, plastid	23.0	62.61
TraesCS4D01G003400.2	Wheat	mitochondrion	64.22	62.42
TraesCS1D01G210800.1	Wheat	plastid	62.94	61.95
TraesCS3B01G220800.1	Wheat	mitochondrion, plastid	22.68	61.74
OQU92191	Sorghum	plastid	61.34	61.34
Os04t0291100-01	Rice	mitochondrion	60.06	59.87
Os10t0547900-01	Rice	cytosol	59.74	59.55
Os10t0548000-02	Rice	cytosol, peroxisome, plastid	60.06	58.93
Zm00001d029840_P003	Maize	plastid	62.62	58.68
Zm00001d019754_P001	Maize	mitochondrion, plastid	65.81	58.36
Zm00001d025129_P001	Maize	mitochondrion	43.13	57.45
VIT_08s0040g03400.t01	Wine grape	plastid	59.11	57.1
VIT_17s0000g08920.t01	Wine grape	cytosol	47.6	45.15
VIT_02s0025g02190.t01	Wine grape	cytosol	47.6	44.35
VIT_16s0050g00750.t01	Wine grape	plastid	79.87	40.0
VIT_12s0059g00270.t01	Wine grape	plastid	35.78	28.07
VIT_17s0000g00520.t01	Wine grape	cytosol, mitochondrion, peroxisome	32.59	27.49
VIT_19s0014g03160.t01	Wine grape	plastid	33.23	26.26

Protein Annotations

EntrezGene:100247484	wikigene:100247484	MapMan:23.1.3.5.1	Gene3D:3.40.50.720	UniProt:A5BG80	EMBL:AM458444
ProteinID:CAN65620	ProteinID:CAN65620.1	ProteinID:CBI22688	ProteinID:CBI22688.3	EMBL:FN595243	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EntrezGene:LOC100247484
wikigene:LOC100247484	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00081	PANTHER:PTHR24320	PANTHER:PTHR24320:SF121
InterPro:SDR_fam	SUPFAM:SSF51735	UniParc:UPI0001520C19	ArrayExpress:VIT_16s0050g00760	EnsemblPlantsGene:VIT_16s0050g00760	EnsemblPlants:VIT_16s0050g00760.t01
RefSeq:XP_002272242	RefSeq:XP_002272242.2	:	:	:	:

Description

No Description!

Coordinates

chr16:+:17700895..17708036

Molecular Weight (calculated)

33859.5 Da

IEP (calculated)

9.726

GRAVY (calculated)

-0.091

Length

313 amino acids

Sequence
(BLAST)

001: MWWFGRNGAS GFSASSTAVE VTHGIDGTGL TAIVTGASSG IGTETARVLA LRGVHVVMAV RNMAAGREVK EAIAKEIPTA KIDAMELDLS SMASVRKFAS
101: EFSSSGLPLN LLINNAGLMA TPFMLSKDNI ELQFATNHIG HFLLTNLLLE TMKKTARESN KEGRIVNVSS RRHRFSYHEG IRFDMINDQS GYNRLSAYGQ
201: SKLANVLHAN ELSRRLKDDG ANITANSLHP GAIATNLFRH VPLVGGFIDI FGKYVVKNVQ QGAATTCYVA LHPEVKGTTG EYFADSNIAK GSSQANDPEL
301: AKKLWDFSLS LIK

Best Arabidopsis Sequence Match ( AT4G23420.2 )
(BLAST)

001: MWFFGSKGAS GFSSRSTAEE VTHGVDGTGL TAIVTGASSG IGVETARVLA LRGVHVVMAV RNTGAGAKVK EDIVKQVPGA KVDVMELELS SMESVRKFAS
101: EYKSAGLPLN LLINNAGIMA CPFMLSKDNI ELQFATNHLG HFLLTKLLLD TMKNTSRESK REGRIVNVSS EAHRYSYPEG VRFDKINDES SYSSIRAYGQ
201: SKLCNVLHAN ELAKQLKEDG VNITANSLHP GAIMTNLWGY FNSYLAGAVG AVAKYMVKSV PQGAATTCYV ALNPQVAGVT GEYFSDSNIA KPIELVKDTE
301: LAKKLWDFST KLTDSQ

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JNJ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.