Factsheet for VIT_17s0000g00520.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
plastid 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09442	Soybean	cytosol	79.78	78.51
KRH38907	Soybean	endoplasmic reticulum	79.25	77.78
CDX92838	Canola	cytosol	66.85	77.5
Solyc03g098460.2.1	Tomato	cytosol	79.78	76.88
CDX89228	Canola	cytosol, nucleus, peroxisome	76.55	76.14
PGSC0003DMT400026316	Potato	cytosol	78.98	76.1
Bra026308.1-P	Field mustard	cytosol, nucleus, peroxisome	76.28	75.87
CDY19025	Canola	cytosol	76.28	75.87
AT4G27760.1	Thale cress	cytosol	75.74	74.73
AT5G53090.1	Thale cress	cytosol	75.2	74.4
AT5G53100.1	Thale cress	cytosol, golgi, mitochondrion, plasma membrane	69.54	70.88
Bra029096.1-P	Field mustard	nucleus	69.0	67.72
CDY64354	Canola	cytosol	40.7	66.52
Os02t0116500-01	Rice	cytosol	71.43	66.25
Bra019028.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	71.97	65.76
TraesCS6A01G045200.1	Wheat	cytosol	71.7	65.52
TraesCS6D01G051500.1	Wheat	cytosol	71.97	65.28
Bra022628.1-P	Field mustard	cytosol, mitochondrion	70.35	65.09
TraesCS6B01G060600.1	Wheat	cytosol	71.7	64.72
GSMUA_Achr7P04190_001	Banana	cytosol	71.16	64.39
CDY29859	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	63.07	63.93
EES04360	Sorghum	cytosol	71.97	63.12
Zm00001d054039_P001	Maize	cytosol	70.62	62.98
CDX96191	Canola	mitochondrion	71.97	60.68
CDY27027	Canola	golgi, mitochondrion, nucleus	72.24	59.82
Zm00001d014994_P001	Maize	cytosol	68.73	53.57
VIT_16s0050g00760.t01	Wine grape	plastid	27.49	32.59
VIT_02s0025g03380.t01	Wine grape	cytosol	27.49	32.38
VIT_08s0040g03400.t01	Wine grape	plastid	27.76	31.79
VIT_02s0025g02190.t01	Wine grape	cytosol	28.3	31.25
CDY38726	Canola	cytosol, golgi, plastid	68.46	30.53
VIT_17s0000g08920.t01	Wine grape	cytosol	25.07	28.18
VIT_12s0059g00270.t01	Wine grape	plastid	24.26	22.56
VIT_19s0014g03160.t01	Wine grape	plastid	22.64	21.21
VIT_16s0050g00750.t01	Wine grape	plastid	28.84	17.12

Protein Annotations

EntrezGene:100254267	wikigene:100254267	Gene3D:3.40.50.720	MapMan:35.1	ProteinID:CBI15734	ProteinID:CBI15734.3
UniProt:D7SH54	EMBL:FN594950	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	EntrezGene:LOC100254267	wikigene:LOC100254267	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106
PRINTS:PR00080	PRINTS:PR00081	PANTHER:PTHR24320	PANTHER:PTHR24320:SF73	InterPro:SDR_fam	SUPFAM:SSF51735
TIGR:TC54120	UniParc:UPI00015CA240	ArrayExpress:VIT_17s0000g00520	EnsemblPlantsGene:VIT_17s0000g00520	EnsemblPlants:VIT_17s0000g00520.t01	unigene:Vvi.3074
RefSeq:XP_002284398	RefSeq:XP_002284398.1	RefSeq:XP_010663791.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr17:-:344956..353370

Molecular Weight (calculated)

40964.2 Da

IEP (calculated)

5.801

GRAVY (calculated)

-0.061

Length

371 amino acids

Sequence
(BLAST)

001: MGKTTSSSGG KQGLGWMEWL RGWLYVIYEM LFQRISASHL QNPLPLPPLH DLTCIITGST SGIGLQIARQ LAEAGAHVVM AVRNSKAAND LIQKWQSEWS
101: GKGLPLNIEV MELDLLSLDS VARFCEAWNA RSAPLHVLIN NAGIFSIGEP QKFSKDGYEE HMQVNHLAPA LLSILLLPSL IRGSPSRIVN VNSVMHYIGF
201: VDTEDMNVVS GKRKYTSLVG YSSSKLAQVQ FSSVLHKRLP AEAGVSVVCV SPGVVQTNVA RDLPRIVQAA YHLIPYFIFT PQEGSRSALF AATDPQIPEY
301: CEMLKADEWP VSAFISQDCN PTNPSEEAHN IETSYRVWEK TLELIGLPLD SVERLIEGEE VKCRYGGQAE E

Best Arabidopsis Sequence Match ( AT4G27760.1 )
(BLAST)

001: MSDETTSSPS PAPAKKKQNL GWMEWMRGWS SVFGEILFQR ITASHLENPL PLPSVNDLTC VVTGSTSGIG RETARQLAEA GAHVVMAVRN TKAAQELILQ
101: WQNEWSGKGL PLNIEAMEID LLSLDSVARF AEAFNARLGP LHVLINNAGM FAMGEAQKFS EEGYEQHMQV NHLAPALLSV LLLPSLIRGS PSRIINVNSV
201: MHSVGFVDPD DMNVVSGRRK YSSLIGYSSS KLAQIMFSSI LFKKLPLETG VSVVCLSPGV VLTNVARDLS RILQALYAVI PYFIFSPQEG CRSSLFSATD
301: PQIPEYWETL KNDDWPVCPF ISQDCRPANP SEEAHNTETA QRVWKKTLEL VGLPLDAVEK LIEGENIQCR YGAQHE

Arabidopsis Description

FEYDehydrogenase/reductase SDR family member FEY [Source:UniProtKB/Swiss-Prot;Acc:F4JJR8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.