Factsheet for Bra029096.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64354	Canola	cytosol	58.99	98.24
AT5G53100.1	Thale cress	cytosol, golgi, mitochondrion, plasma membrane	78.57	81.59
Bra026308.1-P	Field mustard	cytosol, nucleus, peroxisome	69.05	69.97
VIT_17s0000g00520.t01	Wine grape	cytosol, mitochondrion, peroxisome	67.72	69.0
KRH09442	Soybean	cytosol	65.87	66.05
KRH38907	Soybean	endoplasmic reticulum	65.08	65.08
Bra022628.1-P	Field mustard	cytosol, mitochondrion	67.46	63.59
PGSC0003DMT400026316	Potato	cytosol	64.29	63.12
Solyc03g098460.2.1	Tomato	cytosol	64.02	62.86
Bra019028.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	65.87	61.33
GSMUA_Achr7P04190_001	Banana	cytosol	60.58	55.85
Os02t0116500-01	Rice	cytosol	56.88	53.75
TraesCS6A01G045200.1	Wheat	cytosol	56.61	52.71
TraesCS6D01G051500.1	Wheat	cytosol	56.88	52.57
TraesCS6B01G060600.1	Wheat	cytosol	56.88	52.31
Zm00001d054039_P001	Maize	cytosol	55.82	50.72
EES04360	Sorghum	cytosol	55.82	49.88
Zm00001d014994_P001	Maize	cytosol	56.35	44.75
Bra020819.1-P	Field mustard	cytosol, plastid	27.51	32.3
Bra013690.1-P	Field mustard	plastid	26.72	31.17
Bra017180.1-P	Field mustard	cytosol	26.45	31.15
Bra005188.1-P	Field mustard	cytosol	25.13	29.97
Bra019248.1-P	Field mustard	cytosol	26.19	29.82
Bra035220.1-P	Field mustard	cytosol	24.6	29.34
Bra013757.1-P	Field mustard	cytosol	25.66	29.22
Bra027706.1-P	Field mustard	plastid	25.66	28.03
Bra027725.1-P	Field mustard	plastid	25.93	27.68
Bra009580.1-P	Field mustard	mitochondrion	24.07	27.49
Bra005729.1-P	Field mustard	mitochondrion	23.02	26.28
Bra019049.1-P	Field mustard	plastid	23.55	22.36
Bra026349.1-P	Field mustard	plastid	22.75	22.16
Bra003004.1-P	Field mustard	plastid	22.75	21.34
Bra033415.1-P	Field mustard	plastid	22.49	21.25
Bra030540.1-P	Field mustard	plastid	22.22	21.11
Bra037939.1-P	Field mustard	cytosol	24.87	18.91
Bra027724.1-P	Field mustard	cytosol, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Bra029096.1	EnsemblPlants:Bra029096.1-P	EnsemblPlantsGene:Bra029096	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF73	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	UniParc:UPI000253FFF7	UniProt:M4EJX9	MapMan:35.1	:	:

Description

AT5G53100 (E=6e-154) | oxidoreductase, putative

Coordinates

chrA03:-:6335521..6338367

Molecular Weight (calculated)

42128.9 Da

IEP (calculated)

8.383

GRAVY (calculated)

-0.096

Length

378 amino acids

Sequence
(BLAST)

001: MKRMMSNEIV SSNKTKKDGL GWMVWLRGWV NVLQEILLQR IMASHLHNPF PLPPLNNLTC IVTGSTSGIG SETARQLAEA GAHVVMAVRN IKAAHELIQQ
101: WQTKYYCSGK RLPLNIQAME LDLLSLNSVI RFSNAWNARL SPLHVLINNA GMFSMGGAQK FSEDGYEQHL QVNHLAPALL SLLLLPSLIR ASQSRIISVN
201: SVIHYVGFVD PNDLNFLSGK RKFSSLEGYS SSKLAQVMFN NVLSKRLPLE TGISVLCLSP GVVQTNITRD LPRFIQDIYS ALPYISYSPQ EGCRSSVFSA
301: TDSQIQIYCE KLKTDQKSVC AFISQSCQPT NSSEEAHNVD TSNKVWEKTI ELIGLPLNAL ERLIEGEEVP CRYGNPYQ

Best Arabidopsis Sequence Match ( AT5G53100.1 )
(BLAST)

001: MKKNDGLGWI QWMRGWFNVV QEILLQRIMA SHLQIPFHLP PLNHLTCIVT GSTSGIGSET ARQLAEAGAH VVMAVRNIKA AHELIQQWQT KWSASGEGLP
101: LNIQAMELDL LSLDSVVRFS NAWNARLAPL HVLINNAGMF AMGGAQKFSE DGYEQHMQVN HLAPALLSLL LLPSLIRASR SRIINVNSVM HYVGFVDPND
201: MNFVSGKRKF SSLSAYSSSK LAQVMFNNVL LKKLPLETGI SVVCLSPGVV QTNITRDLPR LVQDLYSALP YFIFSPQEGC RSSLFSATDP QIPNHYQKLK
301: TNEKSVCTLF ISLNCKLTNC SEEAQNVETA NRVWEKTLEL IGLPSDTVER LVEGEVVKCR YRTR

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FGM6]
SUBAcon: [mitochondrion,plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.