CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026308.1-P	Field mustard	cytosol, nucleus, peroxisome	99.46	99.46
CDY19025	Canola	cytosol	98.39	98.39
CDX92838	Canola	cytosol	78.28	91.25
AT4G27760.1	Thale cress	cytosol	90.88	90.16
VIT_17s0000g00520.t01	Wine grape	cytosol, mitochondrion, peroxisome	76.14	76.55
CDY29859	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	74.8	76.23
PGSC0003DMT400026316	Potato	cytosol	75.6	73.25
Solyc03g098460.2.1	Tomato	cytosol	75.34	72.99
KRH09442	Soybean	cytosol	72.65	71.88
KRH38907	Soybean	endoplasmic reticulum	71.85	70.9
CDY70072	Canola	cytosol	30.56	68.26
CDY64354	Canola	cytosol	40.48	66.52
CDX96191	Canola	mitochondrion	75.07	63.64
Os02t0116500-01	Rice	cytosol	67.56	63.0
CDY27027	Canola	golgi, mitochondrion, nucleus	75.07	62.5
GSMUA_Achr7P04190_001	Banana	cytosol	68.1	61.95
TraesCS6A01G045200.1	Wheat	cytosol	67.29	61.82
TraesCS6D01G051500.1	Wheat	cytosol	67.56	61.61
TraesCS6B01G060600.1	Wheat	cytosol	67.29	61.07
Zm00001d054039_P001	Maize	cytosol	67.29	60.34
EES04360	Sorghum	cytosol	66.76	58.87
Zm00001d014994_P001	Maize	cytosol	64.61	50.63
CDX88292	Canola	cytosol	15.82	37.58
CDY53896	Canola	plastid	19.3	36.0
CDY72089	Canola	cytosol	18.23	33.83
CDY72311	Canola	cytosol	18.23	33.66
CDY10884	Canola	plastid	28.42	32.92
CDX76338	Canola	cytosol, plastid	28.42	32.92
CDY69917	Canola	endoplasmic reticulum	26.27	32.13
CDX81232	Canola	cytosol	27.35	31.78
CDY18436	Canola	cytosol	27.35	31.78
CDY13264	Canola	cytosol	26.81	31.55
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	11.53	31.39
CDY52817	Canola	cytosol	26.81	31.25
CDY38726	Canola	cytosol, golgi, plastid	69.44	31.13
CDX74954	Canola	cytosol	26.54	30.94
CDY52816	Canola	cytosol	26.54	30.94
CDX86777	Canola	cytosol	26.27	30.91
CDY53433	Canola	plastid	28.42	30.46
CDY10985	Canola	cytosol	26.54	29.82
CDY44096	Canola	mitochondrion, plastid	28.69	29.64
CDX76323	Canola	cytosol	26.27	29.52
CDY50440	Canola	mitochondrion	26.27	28.91
CDY10440	Canola	plastid	24.93	28.62
CDY40365	Canola	mitochondrion	24.93	28.1
CDY55418	Canola	cytosol	22.25	27.76
CDY11217	Canola	mitochondrion	24.4	27.49
CDY68648	Canola	cytosol	13.4	23.92
CDY18175	Canola	plastid	24.66	23.0
CDX89249	Canola	plastid	24.4	22.92
CDY29311	Canola	plastid	24.13	22.67
CDY15470	Canola	plastid	24.13	22.61
CDY51384	Canola	plastid	24.13	22.61
CDX89877	Canola	plastid	24.13	22.5
CDY14325	Canola	plastid	24.13	22.28
CDY18309	Canola	plastid	19.03	20.34
CDX98171	Canola	plastid	19.03	20.34
CDX71585	Canola	mitochondrion	17.43	19.17
CDY37755	Canola	mitochondrion, plastid	24.4	14.61
CDX92832	Canola	plastid	24.93	14.6
CDY29840	Canola	plastid	24.66	14.53
CDY08387	Canola	cytosol, nucleus, plastid	28.69	12.01
CDY47833	Canola	cytosol, nucleus, plastid	28.42	11.9

Protein Annotations

EnsemblPlants:CDX89228	EnsemblPlantsGene:GSBRNA2T00149417001	Gene3D:3.40.50.720	GO:A0A078DPU7	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF73	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ProteinID:CDX89228
ProteinID:CDX89228.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004EF41E4	MapMan:35.1	:

Description

BnaA01g16650D

Coordinates

chrLK031858:-:261589..264548

Molecular Weight (calculated)

41333.5 Da

IEP (calculated)

4.986

GRAVY (calculated)

-0.095

Length

373 amino acids

Sequence
(BLAST)

001: MSEETASSPS LTKKKSLGWM EWMRGWSSVF GEILFQRITA SHLQNPLPLP PVNDLTCIVT GSTSGIGRET ARQLAEAGAH VVMAVRNTKA AQELIQQWQN
101: EWSGRGLPLN IEAMELDLLS LDSVARFADA WNARLGPLHV LINNAGIFAM GEAQKFSEDG YEQHMQVNHL APSLLSVLLL PSLIRGSPSR IINVNSVMHS
201: VGFVDPDDMN VVSGSRKYSS VVGYSSSKLA QIMFSSVLFK KLPLETGVSV ICLSPGVVLT NVARDLPRFL QFLYALIPYF IFSSQEGCRS TLFSATDPQI
301: PEYWETLKND DWPVCPFISQ DCRPANPSEE SHNTETAQRV WEKTLEMVGL PLDAVEKLIE GEKVQCRYGA QEE

Best Arabidopsis Sequence Match ( AT4G27760.1 )
(BLAST)

001: MSDETTSSPS PAPAKKKQNL GWMEWMRGWS SVFGEILFQR ITASHLENPL PLPSVNDLTC VVTGSTSGIG RETARQLAEA GAHVVMAVRN TKAAQELILQ
101: WQNEWSGKGL PLNIEAMEID LLSLDSVARF AEAFNARLGP LHVLINNAGM FAMGEAQKFS EEGYEQHMQV NHLAPALLSV LLLPSLIRGS PSRIINVNSV
201: MHSVGFVDPD DMNVVSGRRK YSSLIGYSSS KLAQIMFSSI LFKKLPLETG VSVVCLSPGV VLTNVARDLS RILQALYAVI PYFIFSPQEG CRSSLFSATD
301: PQIPEYWETL KNDDWPVCPF ISQDCRPANP SEEAHNTETA QRVWKKTLEL VGLPLDAVEK LIEGENIQCR YGAQHE

Arabidopsis Description

FEYDehydrogenase/reductase SDR family member FEY [Source:UniProtKB/Swiss-Prot;Acc:F4JJR8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.