CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027706.1-P	Field mustard	plastid	97.7	98.27
CDY53896	Canola	plastid	55.75	97.0
AT1G64590.1	Thale cress	plastid	87.93	91.62
CDY72089	Canola	cytosol	42.82	74.13
CDY10985	Canola	cytosol	70.69	74.1
CDY72311	Canola	cytosol	42.82	73.76
KRH41377	Soybean	cytosol	70.98	73.29
CDX76323	Canola	cytosol	69.83	73.19
Solyc08g082870.2.1	Tomato	cytosol	70.4	72.7
PGSC0003DMT400031933	Potato	cytosol	70.4	72.7
VIT_02s0025g02190.t01	Wine grape	cytosol	69.54	72.02
CDY50440	Canola	mitochondrion	69.83	71.68
GSMUA_Achr8P11870_001	Banana	cytosol	67.24	68.82
TraesCS4B01G358400.1	Wheat	mitochondrion	62.93	65.77
TraesCS5A01G527400.1	Wheat	mitochondrion	62.93	65.77
TraesCS4D01G351800.1	Wheat	mitochondrion	62.93	65.57
TraesCS4B01G358200.1	Wheat	mitochondrion, plastid	62.36	65.17
GSMUA_Achr11P...	Banana	cytosol	64.37	64.93
TraesCS5A01G527300.1	Wheat	mitochondrion	63.22	64.71
Os03t0115700-01	Rice	mitochondrion	61.49	64.46
TraesCS4B01G358500.1	Wheat	mitochondrion	62.93	63.66
HORVU4Hr1G086380.1	Barley	mitochondrion, plastid	62.93	63.29
TraesCS4D01G351700.1	Wheat	mitochondrion, plastid	62.07	61.36
Os06t0129100-01	Rice	mitochondrion	62.07	61.19
Zm00001d045495_P001	Maize	mitochondrion	62.93	60.66
TraesCS4B01G358300.1	Wheat	plastid	53.74	59.94
EER87765	Sorghum	mitochondrion	61.78	59.72
OQU93381	Sorghum	mitochondrion	60.92	59.72
TraesCS7A01G061000.1	Wheat	mitochondrion, plastid	60.06	58.87
HORVU7Hr1G011180.12	Barley	plastid	60.63	58.77
Zm00001d027353_P001	Maize	mitochondrion	60.92	58.73
TraesCS7D01G055800.1	Wheat	mitochondrion, plastid	60.63	58.29
TraesCS4A01G428800.1	Wheat	mitochondrion, plastid	59.48	57.66
CDX88292	Canola	cytosol	22.41	49.68
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	19.54	49.63
CDY18436	Canola	cytosol	45.11	48.91
CDY10440	Canola	plastid	45.4	48.62
CDY40365	Canola	mitochondrion	45.69	48.04
CDX81232	Canola	cytosol	43.97	47.66
CDX74954	Canola	cytosol	43.68	47.5
CDY52816	Canola	cytosol	43.68	47.5
CDY52817	Canola	cytosol	43.39	47.19
CDY11217	Canola	mitochondrion	44.25	46.53
CDY55418	Canola	cytosol	38.51	44.82
CDX76338	Canola	cytosol, plastid	40.8	44.1
CDX86777	Canola	cytosol	39.66	43.53
CDY13264	Canola	cytosol	39.37	43.22
CDY10884	Canola	plastid	39.94	43.17
CDY68648	Canola	cytosol	25.57	42.58
CDY69917	Canola	endoplasmic reticulum	37.07	42.3
CDY44096	Canola	mitochondrion, plastid	40.52	39.06
CDX71585	Canola	mitochondrion	37.93	38.94
CDY47833	Canola	cytosol, nucleus, plastid	93.39	36.48
CDY08387	Canola	cytosol, nucleus, plastid	92.82	36.25
CDY70072	Canola	cytosol	14.94	31.14
CDY19025	Canola	cytosol	30.46	28.42
CDX89228	Canola	cytosol, nucleus, peroxisome	30.46	28.42
CDX92838	Canola	cytosol	25.86	28.12
CDY37755	Canola	mitochondrion, plastid	47.7	26.65
CDY29859	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	25.86	24.59
CDY18175	Canola	plastid	28.16	24.5
CDX89877	Canola	plastid	28.16	24.5
CDX89249	Canola	plastid	27.3	23.93
CDY29311	Canola	plastid	27.3	23.93
CDY15470	Canola	plastid	27.3	23.87
CDY51384	Canola	plastid	27.3	23.87
CDY14325	Canola	plastid	26.72	23.02
CDY18309	Canola	plastid	22.13	22.06
CDX98171	Canola	plastid	21.84	21.78
CDY64354	Canola	cytosol	14.08	21.59
CDX96191	Canola	mitochondrion	26.72	21.14
CDY27027	Canola	golgi, mitochondrion, nucleus	27.01	20.98
CDY29840	Canola	plastid	28.74	15.8
CDX92832	Canola	plastid	28.45	15.54
CDY38726	Canola	cytosol, golgi, plastid	28.45	11.9

Protein Annotations

EnsemblPlants:CDY53433	EnsemblPlantsGene:GSBRNA2T00010685001	Gene3D:3.40.50.720	GO:A0A078IWQ6	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF114	PFAM:PF00106	PRINTS:PR00081	ProteinID:CDY53433	ProteinID:CDY53433.1
SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004EB075E	UniProt:A0A078IWQ6	MapMan:35.1	:

Description

BnaCnng25130DBnaCnng25130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IWQ6]

Coordinates

chrLK033202:+:5021..6647

Molecular Weight (calculated)

38065.1 Da

IEP (calculated)

9.572

GRAVY (calculated)

0.024

Length

348 amino acids

Sequence
(BLAST)

001: MIETVKHLIG SGGPSGFGSR STADHVTVNC DLRSLTAIIT GATSGIGAET ARVLAKRGAR LVIPARSLKT AEETKSRILS EFPDAEIIVM HLDLSSLASV
101: RRFVADFESL HLPLNILINN AGKYAHKHAI SEDGVEMTFA TNYLGHFLLT KLLLKNMIET AAQTGVQGRI VNVTSVIHSW FSGDMLQYLA DISRNNRNYD
201: ATRAYALSKL ANVLHTIELS RILHKMDANV TANCVHPGIV RTRLTRDREG LITDLVFFLT SKLLKSVPQA AATTCYVATS PRLRNVCGKY FSDCNEARTS
301: KLGSCNIKAQ RLWTASELLV SPASCTPHLY RTFKCSLTND AICKSQAL

Best Arabidopsis Sequence Match ( AT1G64590.1 )
(BLAST)

001: MIETVKHLIG SGGPSGFGSR STADHVTCNS DLRSLTAIIT GATSGIGAET ARVLAKRGAR LVLPARSVKT AEETKARILS EFPDAEIIVM HLDLSSLTSV
101: RRFVDDFESL NLPLNILINN AGKYAHKHAL SEDGVEMTFA TNYLGHFLLT KLLLKKMIET AAQTGVQGRI VNVTSVVHSW FSGDMLQYLA DISRNNRNYD
201: ATRAYALSKL ANVLHTVELS RLLHKMDANV TANCVHPGIV KTRLTRDREG VVTDLVFFLT SKLLKSVPQA AATTCYVATS PRLRNVCGKY FSDCNEARSS
301: KSGSCNLKAQ RLWTASDLLV SPPNSTTNLS HTSF

Arabidopsis Description

At1g64590/F1N19_15 [Source:UniProtKB/TrEMBL;Acc:Q9SGV6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.