Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G24050.1 | CDX96624 | AT1G20770.1 | 21798944 |
| AT4G24050.1 | CDY01355 | AT1G20770.1 | 21798944 |
| AT4G24050.1 | CDY31868 | AT1G20770.1 | 21798944 |
| AT4G24050.1 | CDY33645 | AT1G20770.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72311 | Canola | cytosol | 98.01 | 97.52 |
| CDY53896 | Canola | plastid | 72.14 | 72.5 |
| CDX76323 | Canola | cytosol | 97.51 | 59.04 |
| CDY10985 | Canola | cytosol | 97.51 | 59.04 |
| Bra013757.1-P | Field mustard | cytosol | 95.52 | 57.83 |
| CDY50440 | Canola | mitochondrion | 95.02 | 56.34 |
| AT4G24050.1 | Thale cress | cytosol | 89.05 | 53.92 |
| CDX88292 | Canola | cytosol | 38.31 | 49.04 |
| CDY10441 | Canola | cytosol, extracellular, mitochondrion, plastid | 30.85 | 45.26 |
| Solyc08g082870.2.1 | Tomato | cytosol | 75.12 | 44.81 |
| VIT_02s0025g02190.t01 | Wine grape | cytosol | 74.63 | 44.64 |
| PGSC0003DMT400031933 | Potato | cytosol | 74.13 | 44.21 |
| KRH41377 | Soybean | cytosol | 73.63 | 43.92 |
| CDY53433 | Canola | plastid | 74.13 | 42.82 |
| GSMUA_Achr8P11870_001 | Banana | cytosol | 68.16 | 40.29 |
| TraesCS4B01G358400.1 | Wheat | mitochondrion | 65.17 | 39.34 |
| TraesCS4B01G358200.1 | Wheat | mitochondrion, plastid | 65.17 | 39.34 |
| TraesCS5A01G527400.1 | Wheat | mitochondrion | 65.17 | 39.34 |
| TraesCS4D01G351800.1 | Wheat | mitochondrion | 65.17 | 39.22 |
| TraesCS5A01G527300.1 | Wheat | mitochondrion | 65.67 | 38.82 |
| GSMUA_Achr11P... | Banana | cytosol | 66.17 | 38.55 |
| Os03t0115700-01 | Rice | mitochondrion | 63.18 | 38.25 |
| TraesCS4B01G358500.1 | Wheat | mitochondrion | 65.17 | 38.08 |
| HORVU4Hr1G086380.1 | Barley | mitochondrion, plastid | 64.18 | 37.28 |
| TraesCS4D01G351700.1 | Wheat | mitochondrion, plastid | 64.68 | 36.93 |
| OQU93381 | Sorghum | mitochondrion | 64.18 | 36.34 |
| Zm00001d027353_P001 | Maize | mitochondrion | 64.18 | 35.73 |
| Os06t0129100-01 | Rice | mitochondrion | 62.69 | 35.69 |
| Zm00001d045495_P001 | Maize | mitochondrion | 63.18 | 35.18 |
| TraesCS4B01G358300.1 | Wheat | plastid | 54.23 | 34.94 |
| HORVU7Hr1G011180.12 | Barley | plastid | 61.19 | 34.26 |
| EER87765 | Sorghum | mitochondrion | 61.19 | 34.17 |
| TraesCS7A01G061000.1 | Wheat | mitochondrion, plastid | 59.2 | 33.52 |
| TraesCS7D01G055800.1 | Wheat | mitochondrion, plastid | 59.7 | 33.15 |
| TraesCS4A01G428800.1 | Wheat | mitochondrion, plastid | 59.2 | 33.15 |
| CDY18436 | Canola | cytosol | 51.74 | 32.4 |
| CDX74954 | Canola | cytosol | 50.75 | 31.88 |
| CDY52816 | Canola | cytosol | 50.75 | 31.88 |
| CDY52817 | Canola | cytosol | 50.25 | 31.56 |
| CDX81232 | Canola | cytosol | 50.25 | 31.46 |
| CDY10440 | Canola | plastid | 49.75 | 30.77 |
| CDX86777 | Canola | cytosol | 48.26 | 30.6 |
| CDY13264 | Canola | cytosol | 47.76 | 30.28 |
| CDY40365 | Canola | mitochondrion | 49.75 | 30.21 |
| CDY70072 | Canola | cytosol | 24.38 | 29.34 |
| CDY11217 | Canola | mitochondrion | 47.26 | 28.7 |
| CDX76338 | Canola | cytosol, plastid | 45.27 | 28.26 |
| CDY10884 | Canola | plastid | 44.78 | 27.95 |
| CDY55418 | Canola | cytosol | 39.3 | 26.42 |
| CDY69917 | Canola | endoplasmic reticulum | 39.3 | 25.9 |
| CDY44096 | Canola | mitochondrion, plastid | 45.27 | 25.21 |
| CDX71585 | Canola | mitochondrion | 35.32 | 20.94 |
| CDX92838 | Canola | cytosol | 31.34 | 19.69 |
| CDY29859 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 33.33 | 18.31 |
| CDX89228 | Canola | cytosol, nucleus, peroxisome | 33.83 | 18.23 |
| CDY19025 | Canola | cytosol | 33.33 | 17.96 |
| CDY68648 | Canola | cytosol | 17.41 | 16.75 |
| CDY37755 | Canola | mitochondrion, plastid | 51.24 | 16.53 |
| CDY47833 | Canola | cytosol, nucleus, plastid | 73.13 | 16.5 |
| CDY08387 | Canola | cytosol, nucleus, plastid | 72.64 | 16.39 |
| CDX96191 | Canola | mitochondrion | 32.84 | 15.0 |
| CDY27027 | Canola | golgi, mitochondrion, nucleus | 33.33 | 14.96 |
| CDY29311 | Canola | plastid | 29.35 | 14.86 |
| CDX89249 | Canola | plastid | 29.35 | 14.86 |
| CDX89877 | Canola | plastid | 28.36 | 14.25 |
| CDY18175 | Canola | plastid | 28.36 | 14.25 |
| CDY14325 | Canola | plastid | 28.36 | 14.11 |
| CDY15470 | Canola | plastid | 27.86 | 14.07 |
| CDY51384 | Canola | plastid | 27.86 | 14.07 |
| CDX98171 | Canola | plastid | 20.4 | 11.75 |
| CDY18309 | Canola | plastid | 20.4 | 11.75 |
| CDY64354 | Canola | cytosol | 10.95 | 9.69 |
| CDX92832 | Canola | plastid | 29.35 | 9.26 |
| CDY29840 | Canola | plastid | 28.86 | 9.16 |
| CDY38726 | Canola | cytosol, golgi, plastid | 33.83 | 8.17 |
Protein Annotations
| EnsemblPlants:CDY72089 | EnsemblPlantsGene:GSBRNA2T00023568001 | Gene3D:3.40.50.720 | GO:A0A078JZG4 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR24320 | PANTHER:PTHR24320:SF114 | PFAM:PF00106 | PRINTS:PR00081 | ProteinID:CDY72089 | ProteinID:CDY72089.1 |
| SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EE78E8 | UniProt:A0A078JZG4 | MapMan:35.1 | : |
Description
BnaAnng39870DBnaAnng39870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JZG4]
Coordinates
chrLK048874:+:909..1963
Molecular Weight (calculated)
21791.2 Da
IEP (calculated)
6.357
GRAVY (calculated)
0.122
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MIDTGRYLIG AAGVSGFGSK STADEVTENC DLRSTTAIIT GATSGIGAET ARVLAKRGAR LIFPARNVKA AEQAKGRIVS EFPETEIVVM ELDLSSMSSV
101: RSFVAGFESL HLPLNFLINN AGRLAHEHAI SEDGIEMTFA TNYLGHFLLT NLLLKKMIQT AEETGVQGRI VNVTSGIHGW FTGDLIEYLR LISQPKWYVS
201: L
101: RSFVAGFESL HLPLNFLINN AGRLAHEHAI SEDGIEMTFA TNYLGHFLLT NLLLKKMIQT AEETGVQGRI VNVTSGIHGW FTGDLIEYLR LISQPKWYVS
201: L
001: MIETVKHLIG SGGPSGFGSR STADHVTCNS DLRSLTAIIT GATSGIGAET ARVLAKRGAR LVLPARSVKT AEETKARILS EFPDAEIIVM HLDLSSLTSV
101: RRFVDDFESL NLPLNILINN AGKYAHKHAL SEDGVEMTFA TNYLGHFLLT KLLLKKMIET AAQTGVQGRI VNVTSVVHSW FSGDMLQYLA DISRNNRNYD
201: ATRAYALSKL ANVLHTVELS RLLHKMDANV TANCVHPGIV KTRLTRDREG VVTDLVFFLT SKLLKSVPQA AATTCYVATS PRLRNVCGKY FSDCNEARSS
301: KSGSCNLKAQ RLWTASDLLV SPPNSTTNLS HTSF
101: RRFVDDFESL NLPLNILINN AGKYAHKHAL SEDGVEMTFA TNYLGHFLLT KLLLKKMIET AAQTGVQGRI VNVTSVVHSW FSGDMLQYLA DISRNNRNYD
201: ATRAYALSKL ANVLHTVELS RLLHKMDANV TANCVHPGIV KTRLTRDREG VVTDLVFFLT SKLLKSVPQA AATTCYVATS PRLRNVCGKY FSDCNEARSS
301: KSGSCNLKAQ RLWTASDLLV SPPNSTTNLS HTSF
Arabidopsis Description
At1g64590/F1N19_15 [Source:UniProtKB/TrEMBL;Acc:Q9SGV6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.