CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 7
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76338	Canola	cytosol, plastid	94.1	89.13
CDY10884	Canola	plastid	81.31	77.02
CDY44096	Canola	mitochondrion, plastid	81.64	68.98
VIT_02s0025g03380.t01	Wine grape	cytosol	65.57	63.49
PGSC0003DMT400032133	Potato	cytosol	65.25	63.17
Solyc08g081200.2.1	Tomato	cytosol	64.59	62.54
KRH41194	Soybean	cytosol, plastid	62.95	60.95
CDY13264	Canola	cytosol	63.28	60.88
KRH59919	Soybean	cytosol, plastid	62.62	60.63
CDX86777	Canola	cytosol	62.95	60.57
EER96376	Sorghum	mitochondrion, plastid	61.31	59.18
GSMUA_AchrUn_...	Banana	cytosol	60.66	59.11
Os09t0570300-01	Rice	plasma membrane	60.98	58.86
CDY68648	Canola	cytosol	39.02	56.94
TraesCS4D01G002700.2	Wheat	mitochondrion, plastid	58.36	56.51
TraesCS4B01G002900.1	Wheat	golgi	58.36	56.33
TraesCS4D01G003200.1	Wheat	golgi	58.03	56.01
TraesCS4A01G311400.1	Wheat	mitochondrion, plastid	57.7	55.7
TraesCS4B01G003400.1	Wheat	plastid	57.38	55.56
GSMUA_Achr2P18620_001	Banana	plastid	57.38	55.38
Solyc08g008060.1.1	Tomato	cytosol	56.72	54.92
Zm00001d019754_P001	Maize	mitochondrion, plastid	61.97	53.54
OQU92195	Sorghum	cytosol	54.75	53.02
CDY55418	Canola	cytosol	51.48	52.51
TraesCS4D01G003400.2	Wheat	mitochondrion	55.41	52.48
CDY18436	Canola	cytosol	55.08	52.34
CDY52816	Canola	cytosol	54.75	52.19
CDX74954	Canola	cytosol	54.75	52.19
OQU92191	Sorghum	plastid	53.44	52.08
EER91987	Sorghum	plastid	53.44	52.08
TraesCS1A01G207500.1	Wheat	cytosol	53.77	52.06
CDX81232	Canola	cytosol	54.43	51.71
Os04t0291100-01	Rice	mitochondrion	53.11	51.59
CDY52817	Canola	cytosol	54.1	51.56
TraesCS1B01G221200.1	Wheat	cytosol	53.11	51.43
Zm00001d047150_P003	Maize	plastid	53.11	51.43
Os10t0547900-01	Rice	cytosol	51.8	50.32
TraesCS1D01G210800.1	Wheat	plastid	52.46	50.31
Zm00001d029840_P003	Maize	plastid	55.08	50.3
PGSC0003DMT400014810	Potato	mitochondrion	40.33	50.2
CDY10440	Canola	plastid	53.44	50.15
CDY11217	Canola	mitochondrion	54.1	49.85
Os10t0548000-02	Rice	cytosol, peroxisome, plastid	52.13	49.84
CDY40365	Canola	mitochondrion	53.77	49.55
TraesCS5B01G461100.1	Wheat	mitochondrion, plastid	18.03	47.83
TraesCS4A01G492800.1	Wheat	mitochondrion, plastid	17.05	45.22
TraesCS3B01G220800.1	Wheat	mitochondrion, plastid	17.05	45.22
Zm00001d025129_P001	Maize	mitochondrion	34.75	45.11
CDX88292	Canola	cytosol	21.64	42.04
CDY53896	Canola	plastid	26.89	41.0
CDY72311	Canola	cytosol	26.23	39.6
CDY10985	Canola	cytosol	42.95	39.46
CDY72089	Canola	cytosol	25.9	39.3
CDX76323	Canola	cytosol	42.3	38.86
CDY50440	Canola	mitochondrion	42.95	38.64
CDY53433	Canola	plastid	42.3	37.07
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	14.43	32.12
CDX92838	Canola	cytosol	29.84	28.44
CDX71585	Canola	mitochondrion	31.15	28.02
CDY70072	Canola	cytosol	14.75	26.95
CDY19025	Canola	cytosol	32.46	26.54
CDX89228	Canola	cytosol, nucleus, peroxisome	32.13	26.27
CDX89249	Canola	plastid	32.46	24.94
CDY29311	Canola	plastid	32.46	24.94
CDY15470	Canola	plastid	32.13	24.62
CDY51384	Canola	plastid	32.13	24.62
CDY18175	Canola	plastid	31.8	24.25
CDY29859	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	28.85	24.04
CDY14325	Canola	plastid	31.8	24.01
CDX89877	Canola	plastid	31.48	24.0
CDY64354	Canola	cytosol	17.7	23.79
CDY18309	Canola	plastid	26.23	22.92
CDX98171	Canola	plastid	25.9	22.64
CDX96191	Canola	mitochondrion	32.13	22.27
CDY27027	Canola	golgi, mitochondrion, nucleus	32.13	21.88
CDY37755	Canola	mitochondrion, plastid	40.66	19.9
CDY29840	Canola	plastid	32.46	15.64
CDX92832	Canola	plastid	32.13	15.38
CDY08387	Canola	cytosol, nucleus, plastid	42.3	14.48
CDY47833	Canola	cytosol, nucleus, plastid	41.97	14.37
CDY38726	Canola	cytosol, golgi, plastid	31.8	11.66

Protein Annotations

EnsemblPlants:CDY69917	EnsemblPlantsGene:GSBRNA2T00093629001	Gene3D:3.40.50.720	GO:A0A078JWI2	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF146	PFAM:PF00106	PRINTS:PR00081	ProteinID:CDY69917	ProteinID:CDY69917.1
SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF51735	UniParc:UPI0004EE6064	UniProt:A0A078JWI2	MapMan:35.1

Description

BnaAnng32000DBnaAnng32000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JWI2]

Coordinates

chrLK040678:-:2062..3609

Molecular Weight (calculated)

33388.0 Da

IEP (calculated)

9.315

GRAVY (calculated)

-0.030

Length

305 amino acids

Sequence
(BLAST)

001: MDFVWFLKLS FVSSFMFSGA SSGIGVETAR VLALRGVHVV MAVRNTVSGA KVKQDILNQV PGAKLDVMEL DLSSIESVRR FASDYKSTGL PLNILINNAG
101: VMACPFMLSK DNIELQFATN HLGHFLLTKL LLDTMKNTSR ESKREGRIVN LSSEAHRFSY PEGVRFDKIN DVSSYSSISA YGQSKLCNVL HANELARQLK
201: EDGVNITVNS LHPGAIMTSL WRHFNSYLAG AVSALASYFI KTIPQGAATT CYLALSPQVA GVTGEYFRNC NITKPSSFGQ DSELAKKVWD FSTKLTDSHS
301: GKGHS

Best Arabidopsis Sequence Match ( AT4G23420.3 )
(BLAST)

001: MQSSNQISTE ILRPLKKKIP NKSQRASGFS SRSTAEEVTH GVDGTGLTAI VTGASSGIGV ETARVLALRG VHVVMAVRNT GAGAKVKEDI VKQVPGAKVD
101: VMELELSSME SVRKFASEYK SAGLPLNLLI NNAGIMACPF MLSKDNIELQ FATNHLGHFL LTKLLLDTMK NTSRESKREG RIVNVSSEAH RYSYPEGVRF
201: DKINDESSYS SIRAYGQSKL CNVLHANELA KQLKEDGVNI TANSLHPGAI MTNLWGYFNS YLAGAVGAVA KYMVKSVPQG AATTCYVALN PQVAGVTGEY
301: FSDSNIAKPI ELVKDTELAK KLWDFSTKLT DSQ

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JNJ2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.