CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41194	Soybean	cytosol, plastid	96.83	96.83
VIT_02s0025g03380.t01	Wine grape	cytosol	74.92	74.92
CDY13264	Canola	cytosol	74.92	74.45
CDX86777	Canola	cytosol	74.29	73.82
Bra035220.1-P	Field mustard	cytosol	74.29	73.82
AT4G11410.1	Thale cress	cytosol, mitochondrion	73.65	73.19
KRG91556	Soybean	cytosol	72.38	72.84
PGSC0003DMT400032133	Potato	cytosol	72.38	72.38
Solyc08g081200.2.1	Tomato	cytosol	72.06	72.06
GSMUA_AchrUn_...	Banana	cytosol	71.43	71.89
EER96376	Sorghum	mitochondrion, plastid	69.52	69.3
CDY10884	Canola	plastid	70.48	68.94
Bra013690.1-P	Field mustard	plastid	70.16	68.21
KRH08894	Soybean	plastid	46.98	68.2
KRH38432	Soybean	cytosol	68.89	68.03
AT4G23430.2	Thale cress	plastid	69.52	68.01
TraesCS4D01G003200.1	Wheat	golgi	67.94	67.72
Solyc08g008060.1.1	Tomato	cytosol	67.62	67.62
KRH08897	Soybean	cytosol, mitochondrion	66.98	67.2
TraesCS4B01G002900.1	Wheat	golgi	67.3	67.09
Os09t0570300-01	Rice	plasma membrane	66.98	66.77
KRH08898	Soybean	cytosol	66.98	66.77
TraesCS4A01G311400.1	Wheat	mitochondrion, plastid	66.98	66.77
KRH38419	Soybean	plastid	67.62	66.77
TraesCS4D01G002700.2	Wheat	mitochondrion, plastid	66.67	66.67
CDX76338	Canola	cytosol, plastid	67.94	66.46
Bra020819.1-P	Field mustard	cytosol, plastid	67.94	66.46
TraesCS4B01G003400.1	Wheat	plastid	66.35	66.35
KRH38433	Soybean	cytosol	66.98	66.14
GSMUA_Achr2P18620_001	Banana	plastid	66.03	65.82
PGSC0003DMT400014810	Potato	mitochondrion	50.79	65.31
KRH38426	Soybean	cytosol	66.35	64.11
KRG91557	Soybean	cytosol	42.22	63.94
TraesCS4D01G003400.2	Wheat	mitochondrion	64.44	63.04
KRH35271	Soybean	plastid	69.84	63.04
AT4G23420.3	Thale cress	plastid	66.35	62.76
CDY69917	Canola	endoplasmic reticulum	60.63	62.62
KRH38431	Soybean	plastid	64.13	62.54
KRH35274	Soybean	cytosol, mitochondrion, plastid	70.48	61.84
OQU92195	Sorghum	cytosol	61.59	61.59
CDY44096	Canola	mitochondrion, plastid	70.48	61.5
OQU92191	Sorghum	plastid	60.32	60.7
Zm00001d019754_P001	Maize	mitochondrion, plastid	67.62	60.34
TraesCS1B01G221200.1	Wheat	cytosol	60.32	60.32
EER91987	Sorghum	plastid	59.68	60.06
Zm00001d047150_P003	Maize	plastid	60.0	60.0
TraesCS5B01G461100.1	Wheat	mitochondrion, plastid	21.9	60.0
TraesCS1A01G207500.1	Wheat	cytosol	60.0	60.0
TraesCS4A01G492800.1	Wheat	mitochondrion, plastid	21.27	58.26
TraesCS1D01G210800.1	Wheat	plastid	58.73	58.18
Os04t0291100-01	Rice	mitochondrion	57.78	57.96
TraesCS3B01G220800.1	Wheat	mitochondrion, plastid	20.95	57.39
Os10t0547900-01	Rice	cytosol	57.14	57.32
Zm00001d029840_P003	Maize	plastid	60.63	57.19
Os10t0548000-02	Rice	cytosol, peroxisome, plastid	57.46	56.74
Zm00001d025129_P001	Maize	mitochondrion	42.22	56.6
KRG95813	Soybean	nucleus	57.78	56.35
KRH08895	Soybean	cytosol	67.62	55.76
KRH67540	Soybean	nucleus	57.14	55.73
KRH32305	Soybean	plastid	56.51	55.11
KRH19708	Soybean	nucleus	55.24	53.87
KRH54355	Soybean	cytosol	46.67	44.55
KRH57109	Soybean	mitochondrion	46.98	43.92
KRH03249	Soybean	mitochondrion, plastid	46.35	43.32
KRH41377	Soybean	cytosol	44.13	41.25
KRH63592	Soybean	plastid	46.35	41.01
KRH55334	Soybean	plastid	34.6	27.32
KRH38907	Soybean	endoplasmic reticulum	32.38	26.98
KRH09442	Soybean	cytosol	32.06	26.79
KRH26074	Soybean	plastid	28.57	26.32
KRH27209	Soybean	nucleus, plastid	33.33	26.32

Protein Annotations

EntrezGene:100793781	MapMan:23.1.3.5.1	Gene3D:3.40.50.720	EMBL:ACUP02003342	EnsemblPlantsGene:GLYMA_05G208800	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	UniProt:I1K6H5
EnsemblPlants:KRH59919	ProteinID:KRH59919	ProteinID:KRH59919.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00081
PANTHER:PTHR24320	PANTHER:PTHR24320:SF146	InterPro:SDR_fam	SUPFAM:SSF51735	UniParc:UPI0002339861	SEG:seg

Description

hypothetical protein

Coordinates

chr5:+:39072320..39075174

Molecular Weight (calculated)

34325.2 Da

IEP (calculated)

7.723

GRAVY (calculated)

-0.035

Length

315 amino acids

Sequence
(BLAST)

001: MWFLGWKGAS GFSASSTAEQ VTQGIDGTAL TAIVTGATSG LGLETTRVLA LRGVHVVMAV RSLDSGKNVK ETILKEIPSA KIDVMELDLS SMASVRKFAA
101: DFNSSGLPLN ILINNAGVMA TPFTLSQDNI ELQFATNHLG HFLLTNLLLE TMKKTVGVCN QEGRIVILSS EAHRFAYREG IQFDKINDES GYSSYFAYGQ
201: SKLANILHAN ELARRLKEEG VEITVNSLHP GSIITNILRY HDYINALANM VGKYFLKNVQ QGAATQCYVA LHPQVKGISG EYFMDSNKGN PASLAKDSEL
301: AKKLWEFSLS LTNPK

Best Arabidopsis Sequence Match ( AT4G11410.1 )
(BLAST)

001: MWPFWWKGAS GFSARSTAEE VTHGIDGTGL TAIVTGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR DKILKEIPQA KIDVMKLDLS SMASVRSFAS
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LDY7]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.