Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG91556 | Soybean | cytosol | 80.8 | 90.1 |
| KRG91557 | Soybean | cytosol | 48.71 | 81.73 |
| KRH35274 | Soybean | cytosol, mitochondrion, plastid | 79.94 | 77.72 |
| Solyc03g025410.2.1 | Tomato | nucleus | 68.48 | 76.36 |
| PGSC0003DMT400040845 | Potato | cytosol | 68.48 | 76.36 |
| KRH38432 | Soybean | cytosol | 69.34 | 75.86 |
| KRH08894 | Soybean | plastid | 46.7 | 75.12 |
| KRH08897 | Soybean | cytosol, mitochondrion | 67.05 | 74.52 |
| PGSC0003DMT400040847 | Potato | cytosol | 64.18 | 71.57 |
| Solyc03g025390.2.1 | Tomato | cytosol | 63.32 | 70.61 |
| KRH08898 | Soybean | cytosol | 63.9 | 70.57 |
| PGSC0003DMT400085601 | Potato | plastid | 32.38 | 70.19 |
| GSMUA_AchrUn_... | Banana | cytosol | 62.75 | 69.97 |
| GSMUA_Achr2P18620_001 | Banana | plastid | 63.32 | 69.94 |
| KRH59919 | Soybean | cytosol, plastid | 63.04 | 69.84 |
| Solyc03g025400.2.1 | Tomato | cytosol | 63.04 | 69.62 |
| KRH38426 | Soybean | cytosol | 64.76 | 69.33 |
| KRH38433 | Soybean | cytosol | 63.32 | 69.28 |
| KRH41194 | Soybean | cytosol, plastid | 62.46 | 69.21 |
| KRH38431 | Soybean | plastid | 63.9 | 69.04 |
| EER96376 | Sorghum | mitochondrion, plastid | 60.74 | 67.09 |
| TraesCS4D01G003200.1 | Wheat | golgi | 60.46 | 66.77 |
| Os09t0570300-01 | Rice | plasma membrane | 60.17 | 66.46 |
| TraesCS4A01G311400.1 | Wheat | mitochondrion, plastid | 60.17 | 66.46 |
| TraesCS4D01G002700.2 | Wheat | mitochondrion, plastid | 59.89 | 66.35 |
| TraesCS4B01G002900.1 | Wheat | golgi | 59.6 | 65.82 |
| KRH38419 | Soybean | plastid | 59.6 | 65.2 |
| TraesCS4B01G003400.1 | Wheat | plastid | 58.45 | 64.76 |
| TraesCS3B01G220800.1 | Wheat | mitochondrion, plastid | 20.34 | 61.74 |
| TraesCS4A01G492800.1 | Wheat | mitochondrion, plastid | 20.34 | 61.74 |
| TraesCS5B01G461100.1 | Wheat | mitochondrion, plastid | 20.34 | 61.74 |
| TraesCS4D01G003400.2 | Wheat | mitochondrion | 56.45 | 61.18 |
| EER91987 | Sorghum | plastid | 54.73 | 61.02 |
| KRH08895 | Soybean | cytosol | 66.48 | 60.73 |
| OQU92195 | Sorghum | cytosol | 54.73 | 60.63 |
| Os10t0547900-01 | Rice | cytosol | 53.3 | 59.24 |
| KRG95813 | Soybean | nucleus | 54.73 | 59.13 |
| OQU92191 | Sorghum | plastid | 53.01 | 59.11 |
| KRH67540 | Soybean | nucleus | 54.44 | 58.82 |
| Zm00001d047150_P003 | Maize | plastid | 53.01 | 58.73 |
| Os10t0548000-02 | Rice | cytosol, peroxisome, plastid | 53.58 | 58.62 |
| TraesCS1B01G221200.1 | Wheat | cytosol | 52.72 | 58.41 |
| Zm00001d019754_P001 | Maize | mitochondrion, plastid | 59.03 | 58.36 |
| Zm00001d025129_P001 | Maize | mitochondrion | 39.26 | 58.3 |
| TraesCS1A01G207500.1 | Wheat | cytosol | 52.44 | 58.1 |
| KRH32305 | Soybean | plastid | 53.58 | 57.89 |
| Zm00001d029840_P003 | Maize | plastid | 55.01 | 57.48 |
| TraesCS1D01G210800.1 | Wheat | plastid | 52.15 | 57.23 |
| KRH19708 | Soybean | nucleus | 52.44 | 56.66 |
| Os04t0291100-01 | Rice | mitochondrion | 50.43 | 56.05 |
| KRH54355 | Soybean | cytosol | 42.98 | 45.45 |
| KRH57109 | Soybean | mitochondrion | 41.55 | 43.03 |
| KRH03249 | Soybean | mitochondrion, plastid | 40.4 | 41.84 |
| KRH41377 | Soybean | cytosol | 40.4 | 41.84 |
| KRH63592 | Soybean | plastid | 42.41 | 41.57 |
| VIT_16s0050g00750.t01 | Wine grape | plastid | 71.92 | 40.16 |
| KRH55334 | Soybean | plastid | 31.52 | 27.57 |
| KRH38907 | Soybean | endoplasmic reticulum | 28.94 | 26.72 |
| KRH26074 | Soybean | plastid | 26.07 | 26.61 |
| KRH09442 | Soybean | cytosol | 28.65 | 26.53 |
| KRH27209 | Soybean | nucleus, plastid | 28.94 | 25.31 |
Protein Annotations
| EMBL:ACUP02006662 | EMBL:BT097658 | EnsemblPlants:KRH35271 | EnsemblPlantsGene:GLYMA_10G233100 | EntrezGene:100783465 | Gene3D:3.40.50.720 |
| InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR24320 | PANTHER:PTHR24320:SF121 | PFAM:PF00106 | PRINTS:PR00081 |
| ProteinID:KRH35271 | ProteinID:KRH35271.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF51735 | UniParc:UPI0000E648FE |
| UniProt:C6TJ18 | MapMan:23.1.3.5.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:46237132..46242683
Molecular Weight (calculated)
37741.6 Da
IEP (calculated)
10.108
GRAVY (calculated)
-0.123
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLANVLGIS VIRLSGGGAS LSCVRVRKRE CVCVQKMWPF SRKGASGFSS SSTAEQVTEG IDGTGLTAIV TGASSGIGTE TTRVLSLRGV HVIMGVRNML
101: AAKDVKETLL KEIPSAKVDA MELDLSSLES VKKFASEFKS SGLPLNMLIN NAGIMACPFK LSKDKIELQF ATNHLGHFLL TNLLLDTMKK TSRETKKEGR
201: IVNVSSEAHR FTYSEGIRFD KINDESSYSN WRAYGQSKLA NILHANELTR RLKEDGVDIS ANSLHPGVIA TNLSRHISPV NGLTKAIARL VLKNVQQGAA
301: TTCYVALHPQ VKGTSGKYFS ASNVAKTTSQ GTDADLAKNL WDFSMDLTK
101: AAKDVKETLL KEIPSAKVDA MELDLSSLES VKKFASEFKS SGLPLNMLIN NAGIMACPFK LSKDKIELQF ATNHLGHFLL TNLLLDTMKK TSRETKKEGR
201: IVNVSSEAHR FTYSEGIRFD KINDESSYSN WRAYGQSKLA NILHANELTR RLKEDGVDIS ANSLHPGVIA TNLSRHISPV NGLTKAIARL VLKNVQQGAA
301: TTCYVALHPQ VKGTSGKYFS ASNVAKTTSQ GTDADLAKNL WDFSMDLTK
001: MWFFGSKGAS GFSSRSTAEE VTHGVDGTGL TAIVTGASSG IGVETARVLS LRGVHVVMAV RNTDSGAKVK EDIVKQVPGA KLDVMELDLS SMQSVRKFAS
101: EYKSTGLPLN LLINNAGIMA CPFMLSKDNI ELQFATNHLG HFLLTKLLLD TMKSTSRESK REGRIVNLSS EAHRFSYPEG VRFDKINDKS SYSSMRAYGQ
201: SKLCNVLHAN ELTKQLKEDG VNITANSLHP GAIMTNLGRY FNPYLAVAVG AVAKYILKSV PQGAATTCYV ALNPQVAGVS GEYFQDSNIA KPLPLVKDTE
301: LAKKVWDFST KLTDSQSGES SS
101: EYKSTGLPLN LLINNAGIMA CPFMLSKDNI ELQFATNHLG HFLLTKLLLD TMKSTSRESK REGRIVNLSS EAHRFSYPEG VRFDKINDKS SYSSMRAYGQ
201: SKLCNVLHAN ELTKQLKEDG VNITANSLHP GAIMTNLGRY FNPYLAVAVG AVAKYILKSV PQGAATTCYV ALNPQVAGVS GEYFQDSNIA KPLPLVKDTE
301: LAKKVWDFST KLTDSQSGES SS
Arabidopsis Description
TIC32Short-chain dehydrogenase TIC 32, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A2RVM0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.