Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G492800.1 | Wheat | mitochondrion, plastid | 94.78 | 94.78 |
| TraesCS3B01G220800.1 | Wheat | mitochondrion, plastid | 93.04 | 93.04 |
| PGSC0003DMT400085601 | Potato | plastid | 66.96 | 47.83 |
| TraesCS4B01G002900.1 | Wheat | golgi | 91.3 | 33.23 |
| TraesCS4B01G003400.1 | Wheat | plastid | 87.83 | 32.06 |
| TraesCS4D01G003200.1 | Wheat | golgi | 86.09 | 31.33 |
| KRH08894 | Soybean | plastid | 58.26 | 30.88 |
| TraesCS4D01G003400.2 | Wheat | mitochondrion | 82.61 | 29.5 |
| Os09t0570300-01 | Rice | plasma membrane | 75.65 | 27.53 |
| EER96376 | Sorghum | mitochondrion, plastid | 70.43 | 25.63 |
| KRG91557 | Soybean | cytosol | 43.48 | 24.04 |
| GSMUA_AchrUn_... | Banana | cytosol | 65.22 | 23.96 |
| KRH08897 | Soybean | cytosol, mitochondrion | 64.35 | 23.57 |
| VIT_16s0050g00760.t01 | Wine grape | plastid | 63.48 | 23.32 |
| PGSC0003DMT400040845 | Potato | cytosol | 63.48 | 23.32 |
| Solyc03g025410.2.1 | Tomato | nucleus | 63.48 | 23.32 |
| PGSC0003DMT400032133 | Potato | cytosol | 63.48 | 23.17 |
| Solyc03g025400.2.1 | Tomato | cytosol | 63.48 | 23.1 |
| Solyc08g081200.2.1 | Tomato | cytosol | 62.61 | 22.86 |
| KRG91556 | Soybean | cytosol | 61.74 | 22.68 |
| Solyc03g025390.2.1 | Tomato | cytosol | 61.74 | 22.68 |
| Zm00001d019754_P001 | Maize | mitochondrion, plastid | 68.7 | 22.38 |
| PGSC0003DMT400040847 | Potato | cytosol | 60.87 | 22.36 |
| Bra020819.1-P | Field mustard | cytosol, plastid | 61.74 | 22.05 |
| CDX76338 | Canola | cytosol, plastid | 61.74 | 22.05 |
| KRH59919 | Soybean | cytosol, plastid | 60.0 | 21.9 |
| CDY10884 | Canola | plastid | 60.0 | 21.43 |
| VIT_02s0025g03380.t01 | Wine grape | cytosol | 58.26 | 21.27 |
| KRH38426 | Soybean | cytosol | 60.0 | 21.17 |
| AT4G11410.1 | Thale cress | cytosol, mitochondrion | 58.26 | 21.14 |
| AT4G23430.2 | Thale cress | plastid | 59.13 | 21.12 |
| PGSC0003DMT400040848 | Potato | plastid | 57.39 | 21.09 |
| Solyc03g025370.2.1 | Tomato | cytosol, nucleus, plastid | 57.39 | 21.09 |
| KRH41194 | Soybean | cytosol, plastid | 57.39 | 20.95 |
| KRH38431 | Soybean | plastid | 58.26 | 20.74 |
| KRH38432 | Soybean | cytosol | 57.39 | 20.69 |
| Bra013690.1-P | Field mustard | plastid | 58.26 | 20.68 |
| TraesCS1B01G221200.1 | Wheat | cytosol | 56.52 | 20.63 |
| Bra035220.1-P | Field mustard | cytosol | 56.52 | 20.5 |
| CDX86777 | Canola | cytosol | 56.52 | 20.5 |
| CDY13264 | Canola | cytosol | 56.52 | 20.5 |
| KRH38419 | Soybean | plastid | 56.52 | 20.38 |
| KRH35271 | Soybean | plastid | 61.74 | 20.34 |
| KRH38433 | Soybean | cytosol | 55.65 | 20.06 |
| KRH08898 | Soybean | cytosol | 54.78 | 19.94 |
| KRH35274 | Soybean | cytosol, mitochondrion, plastid | 60.87 | 19.5 |
| TraesCS3B01G091800.3 | Wheat | cytosol | 53.04 | 19.06 |
| Solyc08g008060.1.1 | Tomato | cytosol | 52.17 | 19.05 |
| CDY44096 | Canola | mitochondrion, plastid | 59.13 | 18.84 |
| AT4G23420.3 | Thale cress | plastid | 53.91 | 18.62 |
| TraesCS4B01G358200.1 | Wheat | mitochondrion, plastid | 53.91 | 18.62 |
| TraesCS4B01G358400.1 | Wheat | mitochondrion | 53.04 | 18.32 |
| TraesCS4B01G358300.1 | Wheat | plastid | 49.57 | 18.27 |
| KRH08895 | Soybean | cytosol | 60.0 | 18.06 |
| CDY69917 | Canola | endoplasmic reticulum | 47.83 | 18.03 |
| TraesCS5B01G279400.1 | Wheat | plastid | 50.43 | 18.01 |
| TraesCS4B01G097100.1 | Wheat | mitochondrion | 50.43 | 17.96 |
| TraesCS4B01G358500.1 | Wheat | mitochondrion | 53.04 | 17.73 |
| PGSC0003DMT400014810 | Potato | mitochondrion | 32.17 | 15.1 |
| VIT_16s0050g00750.t01 | Wine grape | plastid | 61.74 | 11.36 |
| TraesCS6B01G060600.1 | Wheat | cytosol | 38.26 | 10.71 |
| TraesCS2B01G593000.1 | Wheat | plastid | 33.91 | 10.05 |
| TraesCS1B01G186300.1 | Wheat | plastid | 31.3 | 9.11 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G461100.1 | EnsemblPlantsGene:TraesCS5B01G461100 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR24320 |
| PANTHER:PTHR24320:SF146 | PFAM:PF00106 | SEG:seg | SUPFAM:SSF51735 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5B:-:636914925..636915752
Molecular Weight (calculated)
11685.0 Da
IEP (calculated)
4.647
GRAVY (calculated)
0.532
Length
115 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPWIFSRKG ASGFSWASTV DHVTADISAS GLTAIVTGAS SGIGAETARV LAARGAHVVM AVRNLATAED VGQAVLAESP AASLDLMELD LSSLASVRKF
101: AGDFDATGLP LNILV
101: AGDFDATGLP LNILV
001: MWFFGSKGAS GFSSRSTAEE VTHGVDGTGL TAIVTGASSG IGVETARVLS LRGVHVVMAV RNTDSGAKVK EDIVKQVPGA KLDVMELDLS SMQSVRKFAS
101: EYKSTGLPLN LLINNAGIMA CPFMLSKDNI ELQFATNHLD TMKSTSRESK REGRIVNLSS EAHRFSYPEG VRFDKINDKS SYSSMRAYGQ SKLCNVLHAN
201: ELTKQLKEDG VNITANSLHP GAIMTNLGRY FNPYLAVAVG AVAKYILKSV PQGAATTCYV ALNPQVAGVS GEYFQDSNIA KPLPLVKDTE LAKKVWDFST
301: KLTDSQSGES SS
101: EYKSTGLPLN LLINNAGIMA CPFMLSKDNI ELQFATNHLD TMKSTSRESK REGRIVNLSS EAHRFSYPEG VRFDKINDKS SYSSMRAYGQ SKLCNVLHAN
201: ELTKQLKEDG VNITANSLHP GAIMTNLGRY FNPYLAVAVG AVAKYILKSV PQGAATTCYV ALNPQVAGVS GEYFQDSNIA KPLPLVKDTE LAKKVWDFST
301: KLTDSQSGES SS
Arabidopsis Description
TIC32Short-chain dehydrogenase TIC 32, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A2RVM0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.