Factsheet for TraesCS1B01G221200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G207500.1	Wheat	cytosol	96.19	96.19
TraesCS1D01G210800.1	Wheat	plastid	95.56	94.65
OQU92195	Sorghum	cytosol	81.59	81.59
EER91987	Sorghum	plastid	78.73	79.23
Zm00001d047150_P003	Maize	plastid	78.41	78.41
Zm00001d029840_P003	Maize	plastid	79.68	75.15
OQU92191	Sorghum	plastid	73.33	73.8
Os10t0547900-01	Rice	cytosol	73.33	73.57
Os10t0548000-02	Rice	cytosol, peroxisome, plastid	72.7	71.79
GSMUA_Achr2P18620_001	Banana	plastid	64.76	64.56
VIT_16s0050g00760.t01	Wine grape	plastid	63.81	64.22
VIT_02s0025g03380.t01	Wine grape	cytosol	62.54	62.54
KRG91556	Soybean	cytosol	60.63	61.02
PGSC0003DMT400040848	Potato	plastid	60.0	60.38
KRH59919	Soybean	cytosol, plastid	60.32	60.32
KRH41194	Soybean	cytosol, plastid	60.32	60.32
KRH08894	Soybean	plastid	41.27	59.91
PGSC0003DMT400040845	Potato	cytosol	59.37	59.74
Solyc03g025370.2.1	Tomato	cytosol, nucleus, plastid	59.37	59.74
PGSC0003DMT400085601	Potato	plastid	30.48	59.63
PGSC0003DMT400032133	Potato	cytosol	59.37	59.37
KRH08897	Soybean	cytosol, mitochondrion	59.05	59.24
Solyc03g025390.2.1	Tomato	cytosol	58.73	59.11
Solyc03g025410.2.1	Tomato	nucleus	58.73	59.11
Solyc08g081200.2.1	Tomato	cytosol	59.05	59.05
KRH08898	Soybean	cytosol	58.41	58.23
PGSC0003DMT400040847	Potato	cytosol	57.78	58.15
KRH38419	Soybean	plastid	58.73	57.99
Solyc03g025400.2.1	Tomato	cytosol	57.78	57.59
AT4G11410.1	Thale cress	cytosol, mitochondrion	57.78	57.41
TraesCS4B01G002900.1	Wheat	golgi	57.46	57.28
Bra035220.1-P	Field mustard	cytosol	57.46	57.1
CDX86777	Canola	cytosol	57.46	57.1
CDY13264	Canola	cytosol	57.46	57.1
KRH38432	Soybean	cytosol	57.78	57.05
TraesCS5B01G461100.1	Wheat	mitochondrion, plastid	20.63	56.52
TraesCS4B01G003400.1	Wheat	plastid	56.51	56.51
KRH38433	Soybean	cytosol	57.14	56.43
AT4G23430.2	Thale cress	plastid	57.46	56.21
Solyc08g008060.1.1	Tomato	cytosol	56.19	56.19
PGSC0003DMT400014810	Potato	mitochondrion	43.49	55.92
CDY10884	Canola	plastid	57.14	55.9
TraesCS3B01G220800.1	Wheat	mitochondrion, plastid	20.32	55.65
Bra020819.1-P	Field mustard	cytosol, plastid	56.83	55.59
CDX76338	Canola	cytosol, plastid	56.83	55.59
Bra013690.1-P	Field mustard	plastid	57.14	55.56
KRH38426	Soybean	cytosol	57.14	55.21
KRH38431	Soybean	plastid	55.87	54.49
AT4G23420.3	Thale cress	plastid	56.51	53.45
CDY69917	Canola	endoplasmic reticulum	51.43	53.11
KRG91557	Soybean	cytosol	34.92	52.88
KRH35271	Soybean	plastid	58.41	52.72
TraesCS5B01G279400.1	Wheat	plastid	53.33	52.17
KRH35274	Soybean	cytosol, mitochondrion, plastid	59.37	52.09
TraesCS3B01G091800.3	Wheat	cytosol	51.75	50.94
CDY44096	Canola	mitochondrion, plastid	57.46	50.14
TraesCS4B01G097100.1	Wheat	mitochondrion	49.84	48.61
KRH08895	Soybean	cytosol	56.83	46.86
TraesCS4B01G358200.1	Wheat	mitochondrion, plastid	46.35	43.84
TraesCS4B01G358400.1	Wheat	mitochondrion	46.03	43.54
TraesCS4B01G358500.1	Wheat	mitochondrion	46.67	42.73
TraesCS4B01G358300.1	Wheat	plastid	37.46	37.82
VIT_16s0050g00750.t01	Wine grape	plastid	65.71	33.12
TraesCS2B01G593000.1	Wheat	plastid	31.75	25.77
TraesCS1B01G186300.1	Wheat	plastid	28.89	23.04
TraesCS6B01G060600.1	Wheat	cytosol	27.94	21.41

Protein Annotations

EnsemblPlants:TraesCS1B01G221200.1	EnsemblPlantsGene:TraesCS1B01G221200	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR24320
PANTHER:PTHR24320:SF146	PFAM:PF00106	PRINTS:PR00081	SEG:seg	SUPFAM:SSF51735	TIGR:cd05327
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:398142174..398143859

Molecular Weight (calculated)

33749.7 Da

IEP (calculated)

8.384

GRAVY (calculated)

0.134

Length

315 amino acids

Sequence
(BLAST)

001: MWWFYRKGPS GFAGASTAEE VTAGIDGRGL VAVITGASRG IGRETARVLA LRGVRVVMAV RDVSAGVRAK EAVQAEIRGG AEVDVLELDL SSMASVRRFA
101: AEFASLNLPL NILINNAGVM ARDCTRSCDG LELHFATNHI GHFLLTNLLL ENMKSACRDS GVQGRIVNVS SSGHIMTYTE GICFDKVHDP SGLNSLIAYG
201: QSKLANILHM NELSRILKDE GVNISANTVH PGVIVTSLFR NRTIVSALMN TVGRIISRSV QQGAATTCYV AMHPQVQGIT GEYFGNCNIA NPSSQAVDAE
301: LAKKLWNFSL QIVSS

Best Arabidopsis Sequence Match ( AT4G11410.1 )
(BLAST)

001: MWPFWWKGAS GFSARSTAEE VTHGIDGTGL TAIVTGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR DKILKEIPQA KIDVMKLDLS SMASVRSFAS
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LDY7]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.