CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08898	Soybean	cytosol	88.71	89.56
KRG91556	Soybean	cytosol	72.1	73.48
KRH08894	Soybean	plastid	49.84	73.27
KRH08897	Soybean	cytosol, mitochondrion	69.91	71.02
KRH38432	Soybean	cytosol	70.53	70.53
KRH38431	Soybean	plastid	69.91	69.04
PGSC0003DMT400040845	Potato	cytosol	67.4	68.69
Solyc03g025410.2.1	Tomato	nucleus	67.08	68.37
KRH38426	Soybean	cytosol	69.28	67.79
Solyc03g025390.2.1	Tomato	cytosol	66.14	67.41
PGSC0003DMT400040847	Potato	cytosol	65.83	67.09
KRH59919	Soybean	cytosol, plastid	66.14	66.98
KRH41194	Soybean	cytosol, plastid	66.14	66.98
Solyc03g025400.2.1	Tomato	cytosol	64.89	65.51
PGSC0003DMT400085601	Potato	plastid	32.29	63.98
KRH35271	Soybean	plastid	69.28	63.32
GSMUA_AchrUn_...	Banana	cytosol	62.07	63.26
KRG91557	Soybean	cytosol	41.07	62.98
EER96376	Sorghum	mitochondrion, plastid	62.38	62.97
KRH35274	Soybean	cytosol, mitochondrion, plastid	70.85	62.95
GSMUA_Achr2P18620_001	Banana	plastid	61.76	62.34
KRH38419	Soybean	plastid	62.07	62.07
Os09t0570300-01	Rice	plasma membrane	60.19	60.76
KRH08895	Soybean	cytosol	72.1	60.21
TraesCS4B01G002900.1	Wheat	golgi	59.56	60.13
TraesCS4D01G002700.2	Wheat	mitochondrion, plastid	58.93	59.68
TraesCS4D01G003200.1	Wheat	golgi	58.93	59.49
TraesCS4A01G311400.1	Wheat	mitochondrion, plastid	58.62	59.18
TraesCS4B01G003400.1	Wheat	plastid	58.31	59.05
TraesCS4D01G003400.2	Wheat	mitochondrion	59.25	58.7
EER91987	Sorghum	plastid	56.11	57.19
TraesCS1B01G221200.1	Wheat	cytosol	56.43	57.14
OQU92195	Sorghum	cytosol	56.43	57.14
TraesCS1A01G207500.1	Wheat	cytosol	56.11	56.83
TraesCS4A01G492800.1	Wheat	mitochondrion, plastid	20.38	56.52
Zm00001d019754_P001	Maize	mitochondrion, plastid	62.38	56.37
OQU92191	Sorghum	plastid	54.86	55.91
TraesCS5B01G461100.1	Wheat	mitochondrion, plastid	20.06	55.65
TraesCS3B01G220800.1	Wheat	mitochondrion, plastid	20.06	55.65
Os10t0548000-02	Rice	cytosol, peroxisome, plastid	55.49	55.49
Os10t0547900-01	Rice	cytosol	54.55	55.41
TraesCS1D01G210800.1	Wheat	plastid	55.17	55.35
Zm00001d025129_P001	Maize	mitochondrion	40.75	55.32
KRG95813	Soybean	nucleus	55.8	55.11
Os04t0291100-01	Rice	mitochondrion	54.23	55.1
Zm00001d047150_P003	Maize	plastid	54.23	54.92
KRH67540	Soybean	nucleus	55.49	54.8
Zm00001d029840_P003	Maize	plastid	56.74	54.19
KRH32305	Soybean	plastid	54.86	54.18
KRH19708	Soybean	nucleus	54.55	53.87
KRH54355	Soybean	cytosol	47.65	46.06
KRH57109	Soybean	mitochondrion	47.02	44.51
KRH03249	Soybean	mitochondrion, plastid	46.4	43.92
KRH63592	Soybean	plastid	47.34	42.42
KRH41377	Soybean	cytosol	42.95	40.65
VIT_16s0050g00750.t01	Wine grape	plastid	70.85	36.16
KRH55334	Soybean	plastid	35.42	28.32
KRH26074	Soybean	plastid	29.78	27.78
KRH27209	Soybean	nucleus, plastid	34.17	27.32
KRH38907	Soybean	endoplasmic reticulum	30.09	25.4
KRH09442	Soybean	cytosol	29.78	25.2

Protein Annotations

EMBL:ACUP02005815	EnsemblPlants:KRH38433	EnsemblPlantsGene:GLYMA_09G135900	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF146	PFAM:PF00106	PRINTS:PR00081	ProteinID:KRH38433	ProteinID:KRH38433.1
SEG:seg	SUPFAM:SSF51735	UniParc:UPI00029485C9	UniProt:K7LDQ6	MapMan:23.1.3.5.1	:

Description

hypothetical protein

Coordinates

chr9:-:33790026..33796161

Molecular Weight (calculated)

34638.4 Da

IEP (calculated)

6.683

GRAVY (calculated)

-0.113

Length

319 amino acids

Sequence
(BLAST)

001: MGSSGFSSSS TAEEVTQGIN GSGLTAIVTG TTHGIGTETA RVLALRGVHV IMAARDVIAA KAVKEAILKE IPTAKVDAME LDLSSMTSVR KFALEYISSG
101: LPLNILINNA GISAFPFTLS KDNIELQFAT NHLGHFLLTN LLLDTLKKTA SESKKEGRII IVSSDGHQYT YPEGILFDKI NDESSYQKWH AYGQSKLANI
201: LHANELTRLL KEDGIDNITA NSLHPGAIMD TNIYKPEING PVPTDLINRL GSFLLKNIQQ GAATTCYVAL HPQVRGISGE YFSDNNLAKA SSLAKDTNLA
301: KKLWDFSMKT IDYNTHEQI

Best Arabidopsis Sequence Match ( AT4G23420.1 )
(BLAST)

001: MWFFGSKGAS GFSSRSTAEE VTHGVDGTGL TAIVTGASSG IGVETARVLA LRGVHVVMAV RNTGAGAKVK EDIVKQVPGA KVDVMELELS SMESVRKFAS
101: EYKSAGLPLN LLINNAGIMA CPFMLSKDNI ELQFATNHLG HFLLTKLLLD TMKNTSRESK REGRIVNVSS EAHRYSYPEG VRFDKINDES SYSSIRAYGQ
201: SKLCNVLHAN ELAKQLKEDG VNITANSLHP GAIMTNLWGY FNSYLAGAVG AVAKYMVKSV PQGAATTCYV ALNPQVAGVT GEYFSDSNIA KPIELVKDTE
301: LAKKLWDFST KLTDSQ

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JNJ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.