CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035220.1-P	Field mustard	cytosol	100.0	100.0
CDY13264	Canola	cytosol	98.42	98.42
AT4G11410.1	Thale cress	cytosol, mitochondrion	91.48	91.48
KRH59919	Soybean	cytosol, plastid	73.82	74.29
KRH41194	Soybean	cytosol, plastid	72.87	73.33
VIT_02s0025g03380.t01	Wine grape	cytosol	71.92	72.38
PGSC0003DMT400032133	Potato	cytosol	70.03	70.48
Solyc08g081200.2.1	Tomato	cytosol	69.4	69.84
CDY10884	Canola	plastid	70.66	69.57
GSMUA_AchrUn_...	Banana	cytosol	68.14	69.01
EER96376	Sorghum	mitochondrion, plastid	66.25	66.46
CDX76338	Canola	cytosol, plastid	66.88	65.84
Os09t0570300-01	Rice	plasma membrane	65.3	65.51
TraesCS4D01G003200.1	Wheat	golgi	64.67	64.87
TraesCS4B01G002900.1	Wheat	golgi	64.67	64.87
Solyc08g008060.1.1	Tomato	cytosol	64.35	64.76
TraesCS4B01G003400.1	Wheat	plastid	64.35	64.76
TraesCS4D01G002700.2	Wheat	mitochondrion, plastid	64.35	64.76
TraesCS4A01G311400.1	Wheat	mitochondrion, plastid	64.04	64.24
TraesCS4D01G003400.2	Wheat	mitochondrion	64.04	63.04
GSMUA_Achr2P18620_001	Banana	plastid	62.78	62.97
CDY69917	Canola	endoplasmic reticulum	60.57	62.95
PGSC0003DMT400014810	Potato	mitochondrion	48.27	62.45
CDY44096	Canola	mitochondrion, plastid	70.66	62.05
Zm00001d047150_P003	Maize	plastid	60.57	60.95
OQU92195	Sorghum	cytosol	59.94	60.32
EER91987	Sorghum	plastid	58.68	59.42
OQU92191	Sorghum	plastid	57.73	58.47
Zm00001d019754_P001	Maize	mitochondrion, plastid	64.35	57.79
TraesCS1B01G221200.1	Wheat	cytosol	57.1	57.46
TraesCS5B01G461100.1	Wheat	mitochondrion, plastid	20.5	56.52
TraesCS1A01G207500.1	Wheat	cytosol	56.15	56.51
Os10t0547900-01	Rice	cytosol	55.84	56.37
Zm00001d029840_P003	Maize	plastid	58.99	55.99
TraesCS1D01G210800.1	Wheat	plastid	56.15	55.97
Os10t0548000-02	Rice	cytosol, peroxisome, plastid	56.15	55.8
Os04t0291100-01	Rice	mitochondrion	55.2	55.73
TraesCS4A01G492800.1	Wheat	mitochondrion, plastid	20.19	55.65
CDY52816	Canola	cytosol	55.52	55.0
CDX74954	Canola	cytosol	55.52	55.0
CDY18436	Canola	cytosol	55.52	54.83
TraesCS3B01G220800.1	Wheat	mitochondrion, plastid	19.87	54.78
CDY52817	Canola	cytosol	55.2	54.69
CDY68648	Canola	cytosol	35.65	54.07
CDX81232	Canola	cytosol	54.26	53.58
CDY11217	Canola	mitochondrion	54.89	52.57
Zm00001d025129_P001	Maize	mitochondrion	38.8	52.34
CDY10440	Canola	plastid	53.63	52.31
CDX88292	Canola	cytosol	25.87	52.23
CDY40365	Canola	mitochondrion	54.26	51.96
CDY55418	Canola	cytosol	47.63	50.5
CDY72089	Canola	cytosol	30.6	48.26
CDY72311	Canola	cytosol	30.28	47.52
CDY53896	Canola	plastid	29.02	46.0
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	18.61	43.07
CDY10985	Canola	cytosol	44.48	42.47
CDX76323	Canola	cytosol	44.48	42.47
CDY50440	Canola	mitochondrion	44.16	41.3
CDY53433	Canola	plastid	43.53	39.66
CDX71585	Canola	mitochondrion	34.7	32.45
CDY70072	Canola	cytosol	15.14	28.74
CDY29311	Canola	plastid	33.44	26.7
CDX89249	Canola	plastid	33.44	26.7
CDX92838	Canola	cytosol	26.81	26.56
CDY19025	Canola	cytosol	30.91	26.27
CDX89228	Canola	cytosol, nucleus, peroxisome	30.91	26.27
CDY15470	Canola	plastid	32.49	25.88
CDY51384	Canola	plastid	32.49	25.88
CDX89877	Canola	plastid	32.49	25.75
CDY18175	Canola	plastid	32.49	25.75
CDY14325	Canola	plastid	31.86	25.0
CDY18309	Canola	plastid	27.13	24.64
CDX98171	Canola	plastid	26.81	24.36
CDY29859	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	27.44	23.77
CDY37755	Canola	mitochondrion, plastid	43.85	22.31
CDY64354	Canola	cytosol	15.46	21.59
CDX96191	Canola	mitochondrion	27.76	20.0
CDY27027	Canola	golgi, mitochondrion, nucleus	28.08	19.87
CDY29840	Canola	plastid	32.81	16.43
CDX92832	Canola	plastid	32.81	16.33
CDY08387	Canola	cytosol, nucleus, plastid	43.85	15.6
CDY47833	Canola	cytosol, nucleus, plastid	43.53	15.49
CDY38726	Canola	cytosol, golgi, plastid	29.02	11.06

Protein Annotations

EnsemblPlants:CDX86777	EnsemblPlantsGene:GSBRNA2T00145506001	Gene3D:3.40.50.720	GO:A0A078DCI6	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF146	PFAM:PF00106	PRINTS:PR00081	ProteinID:CDX86777	ProteinID:CDX86777.1
SEG:seg	SUPFAM:SSF51735	UniParc:UPI000254693D	MapMan:23.1.3.5.1	:	:

Description

BnaA09g21670D

Coordinates

chrLK031847:+:608990..616107

Molecular Weight (calculated)

34586.2 Da

IEP (calculated)

6.859

GRAVY (calculated)

-0.162

Length

317 amino acids

Sequence
(BLAST)

001: MWPFWWKGAS GFSAHSTAEQ VTHGIDGTAL TAIITGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR AKILKDTPEA KIDVMKLDLS SMASVRSFAS
101: EFKSLDLPLN LLINNAGIMA CPYTLSSDNI ELQFATNHLG HFLLTNLLLD TMKKTANESN TEGRIVILSS EGHRYAYREG IRFDKINDEA SYNTLQAYGQ
201: SKLCNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTLGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISS PNSQGKDTDL
301: AKKLWEFSLS LTGEEEL

Best Arabidopsis Sequence Match ( AT4G11410.1 )
(BLAST)

001: MWPFWWKGAS GFSARSTAEE VTHGIDGTGL TAIVTGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR DKILKEIPQA KIDVMKLDLS SMASVRSFAS
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LDY7]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.